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The map label for this gene is hypA [H]

Identifier: 15921298

GI number: 15921298

Start: 1033495

End: 1033968

Strand: Reverse

Name: hypA [H]

Synonym: ST1046

Alternate gene names: 15921298

Gene position: 1033968-1033495 (Counterclockwise)

Preceding gene: 15921299

Following gene: 15921297

Centisome position: 38.37

GC content: 30.17

Gene sequence:

>474_bases
ATGCGAATAAAAAGGTATAATATACTGCGAGGTAAAATACAATTTATGCATGAGTGGTCAATAGCTTATTCAGTAGTTAA
GACTTTAATAGAAAACTTTAATAAAAAGATTTCTAAAGTCACGTTAGTAATTCCATTGTTTTCCTTTCTTGATATAAAAA
TTTTAAAGGAAGCTTTTAATGAATTAAAAAAAGAGAACCCAATAGTTGAGAATGCTGAATTAGAGGTTAAAATCCAGGAA
CCTACTTTCAGATGCAGAAATGGTAATAGAGAATTTAAATTTTCGGATATTCAACAACAAGTTGGAGAGGTTAAAAATTC
GTATGGTGAAGAATATCCTTTACATTTAATGCCAGAATTGCTTCCAGCATTTGTTAAATGTCCTTATTGTGGATCTCATG
ATATTGAGGCAATAGGTCAAGAAATTTATATAGAAAAGGTTGAAGAATATGGAGCCGTTGAGAGAGTTAGCTAA

Upstream 100 bases:

>100_bases
TAAACCAAACATTCGTAAATGTAACTTACAGAGATAAAAGTTTAAATCAAGATAAGATTAGTTCGACTTTTAAAAATGTT
GAGAACGTTATAAATTATCT

Downstream 100 bases:

>100_bases
AGATAAACTAAAAGATAAAAAAGTAATTGCTATTATGAGTGCTAAAGGTGGTGTTGGGAAGAGCGTAATATCAGCGTTAA
TATCCCTCTCCTTACCTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MRIKRYNILRGKIQFMHEWSIAYSVVKTLIENFNKKISKVTLVIPLFSFLDIKILKEAFNELKKENPIVENAELEVKIQE
PTFRCRNGNREFKFSDIQQQVGEVKNSYGEEYPLHLMPELLPAFVKCPYCGSHDIEAIGQEIYIEKVEEYGAVERVS

Sequences:

>Translated_157_residues
MRIKRYNILRGKIQFMHEWSIAYSVVKTLIENFNKKISKVTLVIPLFSFLDIKILKEAFNELKKENPIVENAELEVKIQE
PTFRCRNGNREFKFSDIQQQVGEVKNSYGEEYPLHLMPELLPAFVKCPYCGSHDIEAIGQEIYIEKVEEYGAVERVS
>Mature_157_residues
MRIKRYNILRGKIQFMHEWSIAYSVVKTLIENFNKKISKVTLVIPLFSFLDIKILKEAFNELKKENPIVENAELEVKIQE
PTFRCRNGNREFKFSDIQQQVGEVKNSYGEEYPLHLMPELLPAFVKCPYCGSHDIEAIGQEIYIEKVEEYGAVERVS

Specific function: Probably plays a role in an hydrogenase nickel cofactor insertion step [H]

COG id: COG0375

COG function: function code R; Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hypA/hybF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000688 [H]

Pfam domain/function: PF01155 HypA [H]

EC number: NA

Molecular weight: Translated: 18389; Mature: 18389

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIKRYNILRGKIQFMHEWSIAYSVVKTLIENFNKKISKVTLVIPLFSFLDIKILKEAFN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELKKENPIVENAELEVKIQEPTFRCRNGNREFKFSDIQQQVGEVKNSYGEEYPLHLMPEL
HHHHCCCCCCCCEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
LPAFVKCPYCGSHDIEAIGQEIYIEKVEEYGAVERVS
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRIKRYNILRGKIQFMHEWSIAYSVVKTLIENFNKKISKVTLVIPLFSFLDIKILKEAFN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELKKENPIVENAELEVKIQEPTFRCRNGNREFKFSDIQQQVGEVKNSYGEEYPLHLMPEL
HHHHCCCCCCCCEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
LPAFVKCPYCGSHDIEAIGQEIYIEKVEEYGAVERVS
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA