| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15921293
Identifier: 15921293
GI number: 15921293
Start: 1030241
End: 1030720
Strand: Direct
Name: 15921293
Synonym: ST1042
Alternate gene names: NA
Gene position: 1030241-1030720 (Clockwise)
Preceding gene: 15921292
Following gene: 15921296
Centisome position: 38.23
GC content: 30.83
Gene sequence:
>480_bases ATGTCGAGAAAAAAGGGAGTATATAACATAGGTCTTAGTTATATAGGCAGAGGAGCTTTATACCTTTTTATATTTTCAAT ATTCTTCGGAATCTCTGAGTATTATAACATTTTATTAGTTGTAGCGATGTTAATTACAGTATTAGCTGGATTAAGTTTTA GACAAGGTTTCTCAAGGTTAAGTGCAGGACATAAGGTGGGATACATATCATCATTTCTGATCATTATTGCTTCTCCACTA ATAATTTTATCATTGGCTTTTCCGCAAATAGGCTTACCAAGTTATTTAGTTTTAATTTCTGGGTTTGTAGGAATAAGTTT TGAATATTATTGGATATATTTTGACTATCGTACAAAAAACCTAAATTATGCTTCACTACTTTGTTCTATTTCTATATTAC TTCTAGTACTTTTAGGCAAAGTGCCATTTTCATTGCTTTTTTTAATAGGCCAAGCTGTCGCTGTTAGGTCATTGAGATAA
Upstream 100 bases:
>100_bases GGAATGGCTGAAGAAATTATAAATAGATATAAAGGAAGATACTTAGAAATTGCAAAGATGATTCAGTATTACGAATACGA ATTTTGGGAGGGATTAAAGA
Downstream 100 bases:
>100_bases TTTATGAAGGATTTTCTTACCTCTACTGCTAATTCTATTATATCATTTGTAATTTTCTCTCTAACCTTAGTATTATCAAC ATAATATACGTACTGTGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MSRKKGVYNIGLSYIGRGALYLFIFSIFFGISEYYNILLVVAMLITVLAGLSFRQGFSRLSAGHKVGYISSFLIIIASPL IILSLAFPQIGLPSYLVLISGFVGISFEYYWIYFDYRTKNLNYASLLCSISILLLVLLGKVPFSLLFLIGQAVAVRSLR
Sequences:
>Translated_159_residues MSRKKGVYNIGLSYIGRGALYLFIFSIFFGISEYYNILLVVAMLITVLAGLSFRQGFSRLSAGHKVGYISSFLIIIASPL IILSLAFPQIGLPSYLVLISGFVGISFEYYWIYFDYRTKNLNYASLLCSISILLLVLLGKVPFSLLFLIGQAVAVRSLR >Mature_158_residues SRKKGVYNIGLSYIGRGALYLFIFSIFFGISEYYNILLVVAMLITVLAGLSFRQGFSRLSAGHKVGYISSFLIIIASPLI ILSLAFPQIGLPSYLVLISGFVGISFEYYWIYFDYRTKNLNYASLLCSISILLLVLLGKVPFSLLFLIGQAVAVRSLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17733; Mature: 17601
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKKGVYNIGLSYIGRGALYLFIFSIFFGISEYYNILLVVAMLITVLAGLSFRQGFSRL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH SAGHKVGYISSFLIIIASPLIILSLAFPQIGLPSYLVLISGFVGISFEYYWIYFDYRTKN HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEEEEEEEECC LNYASLLCSISILLLVLLGKVPFSLLFLIGQAVAVRSLR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRKKGVYNIGLSYIGRGALYLFIFSIFFGISEYYNILLVVAMLITVLAGLSFRQGFSRL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH SAGHKVGYISSFLIIIASPLIILSLAFPQIGLPSYLVLISGFVGISFEYYWIYFDYRTKN HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEEEEEEEECC LNYASLLCSISILLLVLLGKVPFSLLFLIGQAVAVRSLR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA