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The map label for this gene is 15921210

Identifier: 15921210

GI number: 15921210

Start: 944490

End: 944648

Strand: Reverse

Name: 15921210

Synonym: STS112

Alternate gene names: NA

Gene position: 944648-944490 (Counterclockwise)

Preceding gene: 15921214

Following gene: 15921206

Centisome position: 35.06

GC content: 39.62

Gene sequence:

>159_bases
GTGTTACTATCCGTAATAACCGGTCAAGTCAATAGCTTAACTTCAGGTACTTCACCAAGCGTTACTGGCACTGACGTGAC
ATTTTTGAACTTAGTGACGTTGTTTTACATCTTAGTTTTGGTACCCGCTGTAGCCTCTTACAAAATCTATAAGGAGTAA

Upstream 100 bases:

>100_bases
TTGAATTGATGAGTCTAGTATTCTTACAAAGTTAAGAAAGACTAAAGGCACAAATATCGGGGTTTTAATAGGCCTATTTA
CCTTCATACTTGTCGGCGAA

Downstream 100 bases:

>100_bases
AGACAACCGTTTTCTTGTTACAATTTTTACCAGTTATAATGATTTCCGAAATTCGATTTTTTGCAAAGCAACGTTTGCAA
AGCAACGGATTCTTTGCCGT

Product: structural protein VP1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 52; Mature: 52

Protein sequence:

>52_residues
MLLSVITGQVNSLTSGTSPSVTGTDVTFLNLVTLFYILVLVPAVASYKIYKE

Sequences:

>Translated_52_residues
MLLSVITGQVNSLTSGTSPSVTGTDVTFLNLVTLFYILVLVPAVASYKIYKE
>Mature_52_residues
MLLSVITGQVNSLTSGTSPSVTGTDVTFLNLVTLFYILVLVPAVASYKIYKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5566; Mature: 5566

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSVITGQVNSLTSGTSPSVTGTDVTFLNLVTLFYILVLVPAVASYKIYKE
CEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLLSVITGQVNSLTSGTSPSVTGTDVTFLNLVTLFYILVLVPAVASYKIYKE
CEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA