Definition Sulfolobus tokodaii str. 7 chromosome, complete genome.
Accession NC_003106
Length 2,694,756

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The map label for this gene is yedF [C]

Identifier: 15921116

GI number: 15921116

Start: 857337

End: 857588

Strand: Direct

Name: yedF [C]

Synonym: STS099

Alternate gene names: 15921116

Gene position: 857337-857588 (Clockwise)

Preceding gene: 15921115

Following gene: 15921118

Centisome position: 31.82

GC content: 34.13

Gene sequence:

>252_bases
ATGAGTGAAGATCTTAAATTACGAAACCCAGACCAAGTATTAGATGTAAGAGGTGAATCTTGTCCAGTCCCAGAAATGGA
AGCAAGTAAAAAATTAAAGAAAATGAAAGTTGGACAATTACTTGAAGTTTTAACTGATCATCAACCAGCGGTAGACGTAA
CATTACCCTCATTGGCTAAAAACTTAGGTTATCCATACGTAATAATTAAAGATGGTGAGGTTTATCGTGTTAGAATACTT
AAGGTGAAATAG

Upstream 100 bases:

>100_bases
CACATATTTAATCAAATTAATTTCAAATTAATTAATATAAAGGTTTATAAAGAGGTATTTTTTAAAAACGTGTTTTTCAT
TAATTATTTTGGGGATTAAA

Downstream 100 bases:

>100_bases
TTAATGCCACCTAGTATGGTATTACAACCCGTATATCAAGAAAGTTGGGCTTTAATTTATGGTCTTTTCGGTTTAAGCGG
TTTTATTTTAGGTTGGGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 82

Protein sequence:

>83_residues
MSEDLKLRNPDQVLDVRGESCPVPEMEASKKLKKMKVGQLLEVLTDHQPAVDVTLPSLAKNLGYPYVIIKDGEVYRVRIL
KVK

Sequences:

>Translated_83_residues
MSEDLKLRNPDQVLDVRGESCPVPEMEASKKLKKMKVGQLLEVLTDHQPAVDVTLPSLAKNLGYPYVIIKDGEVYRVRIL
KVK
>Mature_82_residues
SEDLKLRNPDQVLDVRGESCPVPEMEASKKLKKMKVGQLLEVLTDHQPAVDVTLPSLAKNLGYPYVIIKDGEVYRVRILK
VK

Specific function: Unknown

COG id: COG0425

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9375; Mature: 9244

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS01148 UPF0033

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEDLKLRNPDQVLDVRGESCPVPEMEASKKLKKMKVGQLLEVLTDHQPAVDVTLPSLAK
CCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHH
NLGYPYVIIKDGEVYRVRILKVK
HCCCCEEEEECCCEEEEEEEEEC
>Mature Secondary Structure 
SEDLKLRNPDQVLDVRGESCPVPEMEASKKLKKMKVGQLLEVLTDHQPAVDVTLPSLAK
CCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHH
NLGYPYVIIKDGEVYRVRILKVK
HCCCCEEEEECCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA