Click here to switch to the map view.

The map label for this gene is yyaJ [H]

Identifier: 15921095

GI number: 15921095

Start: 836150

End: 837289

Strand: Direct

Name: yyaJ [H]

Synonym: ST0861

Alternate gene names: 15921095

Gene position: 836150-837289 (Clockwise)

Preceding gene: 15921094

Following gene: 15921097

Centisome position: 31.03

GC content: 32.28

Gene sequence:

>1140_bases
ATGTTAAGCAAGAGACAATTAGCCTTACTCTCTCTAGGAACATCACTAAGTTTTTGGGATATATTTAATGTTCCTTATAT
AGAGAATTTTGCCTCAAAAAATTTAGGTGAAGTATCTTCAGTATTAATATTATCAGCAGAGATGATAGGATATTTTATAG
GCGGTATTTTTAACGGATTTTTTGCAACCAGATTTGGAAGAAAACCTGGGTTGTTATTATCAATGTTTTTAATAACGTTC
GGTTCTCTTATTGGTCTCTTATCGCTTTCACCAATTCAGTTAGTAATTGCTGAGCTAATTATTGGTATAGGAATTGAAGG
AGAAGTTGCTATAGTTCCTTCTTACGTTTCAGAAATGGTCTCTAAAGATTTTAGAGGAAGAGCTGTAGGCTTCACATCAA
TGTTCGGATTCCTAATGAGTCTTGTAGTAGGTCCTATGGCTGTTTTTCTCGGAGAAAAATATTGGAGGCTATTATTTCTT
CCTAGCATTGTTATAGCTGTATTGGCATTAATCTTTAGATTTAAACTTCCAGAATCAAAAATGTGGATTGAGAGGAATTA
TGAGAAATTAAAATGGGATAAAATAGTGATAATTTTCGTTCTAATTTGGTTTACTAGCTATTTCACTGGATACTCATTAT
TTTCTACACCTATTTTTTACACAATAACTTCAAAAGGATTTGAGAATTCTAGCTTGTACTTCACATACATACTTTACGGT
GATCCATTAGGAGTAATTTTTGCATCAATTCTAAATGATTATTTTGAAAGAAAATATTCCTCGGCATTAGCTAATCTACT
TTCCGGTGGGCTAGTTATAATATGGCCTTTCTTTACTGGCTTACCGTTTCTGGTTATTGGATTTTTAATCATGTTCTTTC
AAGGTTTCAAATTTCCAGTGATGTATACTTATACTTCAGAGAATTTTGCAACTAAGATTAGAACCATAGGATACGGTATT
GCAGACGGTATAGGTCATTTAGGAGGAGCTGTTGGTCCAATAGTTATGGCTTTACTCTACTTAGAAAATGTAAGTATTTC
ATATACTATTGTTGGAATTATGTCAGTCATTTCAGCAGTATTTATATTATACTTTGGTGTATTAACAAAAGGAAAGTCAT
TAGAGGAAATTAAAGGATGA

Upstream 100 bases:

>100_bases
AGAAACATTACCTATAAGTCTAATAATCGGCCTATTAATTTCATTCAGATTAAATGAAATCAATAAAAAAGTTTAAAAAG
TATAAGCAAAATTATACTTT

Downstream 100 bases:

>100_bases
TGAGGCTGCCCATGAAAGATTGGTGATTTTTATTATTGAGAGCCCCGAACTGAATCTAACCAAAAAGAGATGATTTTTTC
ACTAATTTTTCTAAATTCCT

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MLSKRQLALLSLGTSLSFWDIFNVPYIENFASKNLGEVSSVLILSAEMIGYFIGGIFNGFFATRFGRKPGLLLSMFLITF
GSLIGLLSLSPIQLVIAELIIGIGIEGEVAIVPSYVSEMVSKDFRGRAVGFTSMFGFLMSLVVGPMAVFLGEKYWRLLFL
PSIVIAVLALIFRFKLPESKMWIERNYEKLKWDKIVIIFVLIWFTSYFTGYSLFSTPIFYTITSKGFENSSLYFTYILYG
DPLGVIFASILNDYFERKYSSALANLLSGGLVIIWPFFTGLPFLVIGFLIMFFQGFKFPVMYTYTSENFATKIRTIGYGI
ADGIGHLGGAVGPIVMALLYLENVSISYTIVGIMSVISAVFILYFGVLTKGKSLEEIKG

Sequences:

>Translated_379_residues
MLSKRQLALLSLGTSLSFWDIFNVPYIENFASKNLGEVSSVLILSAEMIGYFIGGIFNGFFATRFGRKPGLLLSMFLITF
GSLIGLLSLSPIQLVIAELIIGIGIEGEVAIVPSYVSEMVSKDFRGRAVGFTSMFGFLMSLVVGPMAVFLGEKYWRLLFL
PSIVIAVLALIFRFKLPESKMWIERNYEKLKWDKIVIIFVLIWFTSYFTGYSLFSTPIFYTITSKGFENSSLYFTYILYG
DPLGVIFASILNDYFERKYSSALANLLSGGLVIIWPFFTGLPFLVIGFLIMFFQGFKFPVMYTYTSENFATKIRTIGYGI
ADGIGHLGGAVGPIVMALLYLENVSISYTIVGIMSVISAVFILYFGVLTKGKSLEEIKG
>Mature_379_residues
MLSKRQLALLSLGTSLSFWDIFNVPYIENFASKNLGEVSSVLILSAEMIGYFIGGIFNGFFATRFGRKPGLLLSMFLITF
GSLIGLLSLSPIQLVIAELIIGIGIEGEVAIVPSYVSEMVSKDFRGRAVGFTSMFGFLMSLVVGPMAVFLGEKYWRLLFL
PSIVIAVLALIFRFKLPESKMWIERNYEKLKWDKIVIIFVLIWFTSYFTGYSLFSTPIFYTITSKGFENSSLYFTYILYG
DPLGVIFASILNDYFERKYSSALANLLSGGLVIIWPFFTGLPFLVIGFLIMFFQGFKFPVMYTYTSENFATKIRTIGYGI
ADGIGHLGGAVGPIVMALLYLENVSISYTIVGIMSVISAVFILYFGVLTKGKSLEEIKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Escherichia coli, GI87082404, Length=190, Percent_Identity=27.3684210526316, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI87082231, Length=157, Percent_Identity=31.2101910828025, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1789207, Length=160, Percent_Identity=28.125, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR005828 [H]

Pfam domain/function: PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 42256; Mature: 42256

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSKRQLALLSLGTSLSFWDIFNVPYIENFASKNLGEVSSVLILSAEMIGYFIGGIFNGF
CCCCHHHHHHHHCCCCCHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FATRFGRKPGLLLSMFLITFGSLIGLLSLSPIQLVIAELIIGIGIEGEVAIVPSYVSEMV
HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHH
SKDFRGRAVGFTSMFGFLMSLVVGPMAVFLGEKYWRLLFLPSIVIAVLALIFRFKLPESK
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
MWIERNYEKLKWDKIVIIFVLIWFTSYFTGYSLFSTPIFYTITSKGFENSSLYFTYILYG
HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEEEEECCCCCCCCEEEEEEEEC
DPLGVIFASILNDYFERKYSSALANLLSGGLVIIWPFFTGLPFLVIGFLIMFFQGFKFPV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCHHHHHHHHHHHHCCCCCCE
MYTYTSENFATKIRTIGYGIADGIGHLGGAVGPIVMALLYLENVSISYTIVGIMSVISAV
EEEEECCHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
FILYFGVLTKGKSLEEIKG
HHHHHHHHCCCCCHHHHCC
>Mature Secondary Structure
MLSKRQLALLSLGTSLSFWDIFNVPYIENFASKNLGEVSSVLILSAEMIGYFIGGIFNGF
CCCCHHHHHHHHCCCCCHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FATRFGRKPGLLLSMFLITFGSLIGLLSLSPIQLVIAELIIGIGIEGEVAIVPSYVSEMV
HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHH
SKDFRGRAVGFTSMFGFLMSLVVGPMAVFLGEKYWRLLFLPSIVIAVLALIFRFKLPESK
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
MWIERNYEKLKWDKIVIIFVLIWFTSYFTGYSLFSTPIFYTITSKGFENSSLYFTYILYG
HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEEEEEECCCCCCCCEEEEEEEEC
DPLGVIFASILNDYFERKYSSALANLLSGGLVIIWPFFTGLPFLVIGFLIMFFQGFKFPV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCHHHHHHHHHHHHCCCCCCE
MYTYTSENFATKIRTIGYGIADGIGHLGGAVGPIVMALLYLENVSISYTIVGIMSVISAV
EEEEECCHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
FILYFGVLTKGKSLEEIKG
HHHHHHHHCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 8011666; 9384377 [H]