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The map label for this gene is yggB [C]

Identifier: 15921079

GI number: 15921079

Start: 820284

End: 821192

Strand: Direct

Name: yggB [C]

Synonym: ST0844

Alternate gene names: 15921079

Gene position: 820284-821192 (Clockwise)

Preceding gene: 15921078

Following gene: 15921080

Centisome position: 30.44

GC content: 31.35

Gene sequence:

>909_bases
ATGAATCGACTAGTAACCCTTTTTATAATACTCTTTGTAGTAGTTGGAGTTGCTGTTGCAACAACTGTAATATTATCGGC
AGTACTTCATATTTCAGTCACAATAACTTCAGTAATTAATGCGATATTAATTGGTGTTGTAGGCGTAATCTCAATCAATA
TAATTTCTAGAATAATAAAATTGAGAGCTGGAAATATAGTTGGAAGAACAACTGCCGAAAGTCTTAGTTTGGTAATCCAA
TTCATTGGTTATACTATAATAGTTATATTAGCATTAACAGCAGTTCATGTCGCGGTTACTAGCGCATTAATTGGCGGTAC
AGTCTTTGGTCTTGTAATTGGTTTGGCATTGCAGACGCCTTTATCAAATGTATTTTCCGGGATCTTTCTAATCTTAAGTA
GACCTTTTAATATAGGTGATAGGGTTACAATAACCACATGGCAATACGGCTTATTGGCACCAACTTATCCTCCAAAATTT
TGGTCGAATGATTTCTTAATACCAGGCTATACTGGAATAATTCAAGATATTAATTTAATGTATACAACAATACTAACAGA
TGAGAATGTTGTAATGAAAATTCCTAATAATATCATGATTCAAGCTGCTATATTTGTACATAATGAGGAATACAGACTAG
TTAGGACTAAATATGAAATTCCAAAAGACTTAGATCCTGATTACGTTATACCAGTACTAAAGGAGAAAATTAGTAAACTA
AGTTTCCTAGTTAAAGAACCAGAAATAAAAGTTCTTGATACTACATTAAATACTTACGTAATATCAGTTGATACTTATTG
TAAAGGACAATATGAAGAACCACCAAGAAGTGAAATAATAAAAGTTATTATGAAGACCATAAAAGAGATTCAATCAGTGA
AAGTTAATGAGAAAAATAGTTCTCACTAG

Upstream 100 bases:

>100_bases
TTTTGTATTCTATGCTCGAGAGCAAGAAAATTATTTAATTTAAAACCTTGCCCACTCTACTAATAAAAAATTTTATTAAC
AATCTTTACTTAACCCTTAT

Downstream 100 bases:

>100_bases
TATAGTTTTCCTTACGGTAGGAATAATTCTCATTCTTATTTACCATTTCCTATTTCCATCATATTATATAAAAGGAGTTT
ATTTAATTCCGTCTAGTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Small-Conductance Mechanosensitive Channel Protein; Mechanosensitive Ion Channel; Mechanosensitive Ion Channel Protein MscS; Small Conductance Mechanosensitive Ion Channel

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MNRLVTLFIILFVVVGVAVATTVILSAVLHISVTITSVINAILIGVVGVISINIISRIIKLRAGNIVGRTTAESLSLVIQ
FIGYTIIVILALTAVHVAVTSALIGGTVFGLVIGLALQTPLSNVFSGIFLILSRPFNIGDRVTITTWQYGLLAPTYPPKF
WSNDFLIPGYTGIIQDINLMYTTILTDENVVMKIPNNIMIQAAIFVHNEEYRLVRTKYEIPKDLDPDYVIPVLKEKISKL
SFLVKEPEIKVLDTTLNTYVISVDTYCKGQYEEPPRSEIIKVIMKTIKEIQSVKVNEKNSSH

Sequences:

>Translated_302_residues
MNRLVTLFIILFVVVGVAVATTVILSAVLHISVTITSVINAILIGVVGVISINIISRIIKLRAGNIVGRTTAESLSLVIQ
FIGYTIIVILALTAVHVAVTSALIGGTVFGLVIGLALQTPLSNVFSGIFLILSRPFNIGDRVTITTWQYGLLAPTYPPKF
WSNDFLIPGYTGIIQDINLMYTTILTDENVVMKIPNNIMIQAAIFVHNEEYRLVRTKYEIPKDLDPDYVIPVLKEKISKL
SFLVKEPEIKVLDTTLNTYVISVDTYCKGQYEEPPRSEIIKVIMKTIKEIQSVKVNEKNSSH
>Mature_302_residues
MNRLVTLFIILFVVVGVAVATTVILSAVLHISVTITSVINAILIGVVGVISINIISRIIKLRAGNIVGRTTAESLSLVIQ
FIGYTIIVILALTAVHVAVTSALIGGTVFGLVIGLALQTPLSNVFSGIFLILSRPFNIGDRVTITTWQYGLLAPTYPPKF
WSNDFLIPGYTGIIQDINLMYTTILTDENVVMKIPNNIMIQAAIFVHNEEYRLVRTKYEIPKDLDPDYVIPVLKEKISKL
SFLVKEPEIKVLDTTLNTYVISVDTYCKGQYEEPPRSEIIKVIMKTIKEIQSVKVNEKNSSH

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789291, Length=220, Percent_Identity=26.3636363636364, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33401; Mature: 33401

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLVTLFIILFVVVGVAVATTVILSAVLHISVTITSVINAILIGVVGVISINIISRIIK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRAGNIVGRTTAESLSLVIQFIGYTIIVILALTAVHVAVTSALIGGTVFGLVIGLALQTP
HHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSNVFSGIFLILSRPFNIGDRVTITTWQYGLLAPTYPPKFWSNDFLIPGYTGIIQDINLM
HHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEECCCHHHHHHHHHHH
YTTILTDENVVMKIPNNIMIQAAIFVHNEEYRLVRTKYEIPKDLDPDYVIPVLKEKISKL
EEEEECCCCEEEECCCCEEEEEEEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHH
SFLVKEPEIKVLDTTLNTYVISVDTYCKGQYEEPPRSEIIKVIMKTIKEIQSVKVNEKNS
HHHHCCCCEEEEEEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
SH
CC
>Mature Secondary Structure
MNRLVTLFIILFVVVGVAVATTVILSAVLHISVTITSVINAILIGVVGVISINIISRIIK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRAGNIVGRTTAESLSLVIQFIGYTIIVILALTAVHVAVTSALIGGTVFGLVIGLALQTP
HHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSNVFSGIFLILSRPFNIGDRVTITTWQYGLLAPTYPPKFWSNDFLIPGYTGIIQDINLM
HHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEECCCHHHHHHHHHHH
YTTILTDENVVMKIPNNIMIQAAIFVHNEEYRLVRTKYEIPKDLDPDYVIPVLKEKISKL
EEEEECCCCEEEECCCCEEEEEEEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHH
SFLVKEPEIKVLDTTLNTYVISVDTYCKGQYEEPPRSEIIKVIMKTIKEIQSVKVNEKNS
HHHHCCCCEEEEEEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
SH
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA