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The map label for this gene is yjgF [C]

Identifier: 15921046

GI number: 15921046

Start: 789591

End: 789968

Strand: Reverse

Name: yjgF [C]

Synonym: ST0811

Alternate gene names: 15921046

Gene position: 789968-789591 (Counterclockwise)

Preceding gene: 15921047

Following gene: 15921040

Centisome position: 29.32

GC content: 33.6

Gene sequence:

>378_bases
ATGGAGACTGTATTTACAGAGAAAGCCCCAAAACCTGTTGGACCCTATTCTCAAGCTATTAAAGTAGGAAATACACTCTA
TGTCTCCGGACAAATACCTATAGATCCTAGAACTAATGAAATTGTAAAAGGAGATATAAAAGTACAGACAAGACAAGTAC
TTGATAATATTAAAGAGATTGTTAAAGCAGCGGGCTTCTCGTTATCAGATGTGGCTATGGCTTTTGTATTTTTGAAAGAT
ATGAACATGTTTAATGATTTCAATTCTGTTTATGCGGAATATTTTAAAGATAAACCTCCAGCAAGAGTTACAGTAGAAGT
TTCAAGGTTACCAAAAGATGCTTTAATAGAAATAGCTGTTATATGCTCGAAAGGTTAA

Upstream 100 bases:

>100_bases
CTTATGTTTCCTCAAACTTAGATAGATTAGCTGAGAATATAGATGAAATTATTAGATTAGAGAGGATTAAACGTAAAATT
TAGTTTTACTAATTTCTCAT

Downstream 100 bases:

>100_bases
GAAAAAATCTTTTTTAATAGTTTTTCTGTATGGGGACATTCATGTGGATCTTTATGACTACCATGCTCAACGCAAGCTGC
TGAAATTGGTATTCCTTCAA

Product: translational inhibitor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
METVFTEKAPKPVGPYSQAIKVGNTLYVSGQIPIDPRTNEIVKGDIKVQTRQVLDNIKEIVKAAGFSLSDVAMAFVFLKD
MNMFNDFNSVYAEYFKDKPPARVTVEVSRLPKDALIEIAVICSKG

Sequences:

>Translated_125_residues
METVFTEKAPKPVGPYSQAIKVGNTLYVSGQIPIDPRTNEIVKGDIKVQTRQVLDNIKEIVKAAGFSLSDVAMAFVFLKD
MNMFNDFNSVYAEYFKDKPPARVTVEVSRLPKDALIEIAVICSKG
>Mature_125_residues
METVFTEKAPKPVGPYSQAIKVGNTLYVSGQIPIDPRTNEIVKGDIKVQTRQVLDNIKEIVKAAGFSLSDVAMAFVFLKD
MNMFNDFNSVYAEYFKDKPPARVTVEVSRLPKDALIEIAVICSKG

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family

Homologues:

Organism=Homo sapiens, GI5032215, Length=122, Percent_Identity=43.4426229508197, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI87082396, Length=126, Percent_Identity=46.031746031746, Blast_Score=116, Evalue=4e-28,
Organism=Escherichia coli, GI87082213, Length=122, Percent_Identity=41.8032786885246, Blast_Score=102, Evalue=6e-24,
Organism=Escherichia coli, GI1787245, Length=110, Percent_Identity=33.6363636363636, Blast_Score=80, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71982075, Length=124, Percent_Identity=39.5161290322581, Blast_Score=106, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI25148896, Length=124, Percent_Identity=39.5161290322581, Blast_Score=106, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI71982068, Length=124, Percent_Identity=39.5161290322581, Blast_Score=105, Evalue=4e-24,
Organism=Saccharomyces cerevisiae, GI6322138, Length=119, Percent_Identity=43.6974789915966, Blast_Score=94, Evalue=5e-21,
Organism=Saccharomyces cerevisiae, GI6320899, Length=105, Percent_Identity=41.9047619047619, Blast_Score=86, Evalue=1e-18,
Organism=Drosophila melanogaster, GI19921376, Length=122, Percent_Identity=40.1639344262295, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): Y811_SULTO (Q973T6)

Other databases:

- EMBL:   BA000023
- RefSeq:   NP_376715.1
- PDB:   1X25
- PDBsum:   1X25
- ProteinModelPortal:   Q973T6
- SMR:   Q973T6
- GeneID:   1458774
- GenomeReviews:   BA000023_GR
- KEGG:   sto:ST0811
- NMPDR:   fig|273063.1.peg.883
- HOGENOM:   HBG695954
- OMA:   IEVIAYK
- ProtClustDB:   CLSK626098
- BioCyc:   STOK273063:ST0811-MONOMER
- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897
- Gene3D:   G3DSA:3.30.1330.40
- PANTHER:   PTHR11803
- TIGRFAMs:   TIGR00004

Pfam domain/function: PF01042 Ribonuc_L-PSP; SSF55298 YjgF/chorismate_mutase-like

EC number: NA

Molecular weight: Translated: 13857; Mature: 13857

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METVFTEKAPKPVGPYSQAIKVGNTLYVSGQIPIDPRTNEIVKGDIKVQTRQVLDNIKEI
CCCCCCCCCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCEEECCHHHHHHHHHHHHHHH
VKAAGFSLSDVAMAFVFLKDMNMFNDFNSVYAEYFKDKPPARVTVEVSRLPKDALIEIAV
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCHHHHEEEEE
ICSKG
EECCC
>Mature Secondary Structure
METVFTEKAPKPVGPYSQAIKVGNTLYVSGQIPIDPRTNEIVKGDIKVQTRQVLDNIKEI
CCCCCCCCCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCEEECCHHHHHHHHHHHHHHH
VKAAGFSLSDVAMAFVFLKDMNMFNDFNSVYAEYFKDKPPARVTVEVSRLPKDALIEIAV
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCHHHHEEEEE
ICSKG
EECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479