Click here to switch to the map view.

The map label for this gene is 15920977

Identifier: 15920977

GI number: 15920977

Start: 728153

End: 728587

Strand: Direct

Name: 15920977

Synonym: ST0746

Alternate gene names: NA

Gene position: 728153-728587 (Clockwise)

Preceding gene: 15920975

Following gene: 15920979

Centisome position: 27.02

GC content: 34.94

Gene sequence:

>435_bases
ATGAATTCATCAAAGCTCATTGAGTTTATATTCTCTATCGCATATTTAAAGACAATGGTAGAGAAGTTCTGGTTTGAGAA
GAGTAAGGAGTTCCTAGAACTTGCAAAAAAGCATTTAGATGATGGATACTTCTGGTTTTCTTGTTTTGCAAGCCAACAGA
GCGTCGAGTTTGCACTAAAAGGCCTTCTTGTTAAATATAAGGGTATGTTCCCCTTTACTCATGATTTAGGAGAGTTAGCT
GAAAAGGTTGGAAAAGAGTTAGGAGTTAATGTTCCTGATGATATTATAAGATATTGTGATCTACTCACACCGCACTATGT
GATGTCAAGATACTCGCAATTTACTGAGTATAACAGAAGAAAAGCTGAAGAATGCTTAAACTCAGCTATTACTGTGATTG
AATGGATTAGGAAAAACTTCTATATAAACTGGTAA

Upstream 100 bases:

>100_bases
CATAATATCATAGTCACTAGATTCCCAATAATCTCCTCTAGCTCTGGAACCGAAGAGTACTATTGAGACATTACCATTAT
AGTATTCTATTACTCTCTTT

Downstream 100 bases:

>100_bases
AAAGAAAGAATATATAAAATGATTAACAAGTCTAGAGATAATATCCCTAAGATTTATGTTTAGTAAATGTTGATAAATTA
ATTAATAAAAAATCATTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: HEPN Domain Protein

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MNSSKLIEFIFSIAYLKTMVEKFWFEKSKEFLELAKKHLDDGYFWFSCFASQQSVEFALKGLLVKYKGMFPFTHDLGELA
EKVGKELGVNVPDDIIRYCDLLTPHYVMSRYSQFTEYNRRKAEECLNSAITVIEWIRKNFYINW

Sequences:

>Translated_144_residues
MNSSKLIEFIFSIAYLKTMVEKFWFEKSKEFLELAKKHLDDGYFWFSCFASQQSVEFALKGLLVKYKGMFPFTHDLGELA
EKVGKELGVNVPDDIIRYCDLLTPHYVMSRYSQFTEYNRRKAEECLNSAITVIEWIRKNFYINW
>Mature_144_residues
MNSSKLIEFIFSIAYLKTMVEKFWFEKSKEFLELAKKHLDDGYFWFSCFASQQSVEFALKGLLVKYKGMFPFTHDLGELA
EKVGKELGVNVPDDIIRYCDLLTPHYVMSRYSQFTEYNRRKAEECLNSAITVIEWIRKNFYINW

Specific function: Unknown

COG id: COG2250

COG function: function code S; Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17144; Mature: 17144

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: PS50910 HEPN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSSKLIEFIFSIAYLKTMVEKFWFEKSKEFLELAKKHLDDGYFWFSCFASQQSVEFALK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
GLLVKYKGMFPFTHDLGELAEKVGKELGVNVPDDIIRYCDLLTPHYVMSRYSQFTEYNRR
HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
KAEECLNSAITVIEWIRKNFYINW
HHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNSSKLIEFIFSIAYLKTMVEKFWFEKSKEFLELAKKHLDDGYFWFSCFASQQSVEFALK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
GLLVKYKGMFPFTHDLGELAEKVGKELGVNVPDDIIRYCDLLTPHYVMSRYSQFTEYNRR
HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
KAEECLNSAITVIEWIRKNFYINW
HHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA