| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is 15920877
Identifier: 15920877
GI number: 15920877
Start: 640203
End: 640874
Strand: Reverse
Name: 15920877
Synonym: ST0656
Alternate gene names: NA
Gene position: 640874-640203 (Counterclockwise)
Preceding gene: 15920881
Following gene: 15920876
Centisome position: 23.78
GC content: 33.48
Gene sequence:
>672_bases ATGCCTGGAGGAAGAGGTAGGATAGGAGTTATATTGCCAGCTAATAATGCAGGAATGGAATACGATTTATGGAAAATGGC ACCAGAAGGTGTTTCTATACACTCAACGAGAATGAAGCCTACTAAAGGATGTGAACCAGAAAATGTAGAAGAATTTGAGA AAGAGTTGAAATACTCTTACTCTTTGTTAGCTGAAGTCTCAGACATAATTATTTACGGTAGAACTTATGGTACTCATAAA CATGCTCATGTTATAAAGAGAGTAATAAAAGATGTAGTTATACCAGAAGAATCTGTATATGAACTACTTAAGAAATTAAA TGTTAGAAAACTTTGGATAGGAACTCCTTATATAAAGGAGAGGACTTTAGAAGAAGTAGAATGGTGGAGAAATAAGGGGT TTGAAATAGTTGGCTATGATGGATTGGGAAAAATTAGAGGAATAGATATCTCAAATACACCAATTTTCACAATATATAGG TTAGTAAAAAGGCATTTAAATGAAGTTCTTAAGGCTGATGCAGTATATATTGCTTGTACAGCACTTTCAACTTATGAAGC TGTTCAATACTTACATGAGGATTTAGATATGCCAGTAGTTTCAGAAAATGCTGCTGCAATGTGGGAAGCATTAAATAAAT TAAAGATAAAAGCAAAACTTCCAGGGTTTTAG
Upstream 100 bases:
>100_bases CCCTTCCTTCTCATACTGAAAAAAATCCTTTATTGCTTTTCTAATTTTTGTCTTAATACTCACAGAACTTTTATAGTTAC ATGTAATAAAAAAGGTTACA
Downstream 100 bases:
>100_bases AAATATAAACTATCAAAAAGAAAAAAGTTTATGGAACAAGTTAAAAGGTTAAAAATAACGGTCTTAAGCGACAATTTCAC TAGCACAATAATTCCTCCGC
Product: arylmalonate decarboxylase
Products: NA
Alternate protein names: Maleate Cis-Trans Isomerase; Asp/Glu/Hydantoin Racemase; Asp/Glu Racemase; Decarboxylase; Asp/Glu/Hydantoin Racemase Family; Asp/Glu/Hydantoin Racemase Family Protein; Ectoine Utilization Protein EutA
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MPGGRGRIGVILPANNAGMEYDLWKMAPEGVSIHSTRMKPTKGCEPENVEEFEKELKYSYSLLAEVSDIIIYGRTYGTHK HAHVIKRVIKDVVIPEESVYELLKKLNVRKLWIGTPYIKERTLEEVEWWRNKGFEIVGYDGLGKIRGIDISNTPIFTIYR LVKRHLNEVLKADAVYIACTALSTYEAVQYLHEDLDMPVVSENAAAMWEALNKLKIKAKLPGF
Sequences:
>Translated_223_residues MPGGRGRIGVILPANNAGMEYDLWKMAPEGVSIHSTRMKPTKGCEPENVEEFEKELKYSYSLLAEVSDIIIYGRTYGTHK HAHVIKRVIKDVVIPEESVYELLKKLNVRKLWIGTPYIKERTLEEVEWWRNKGFEIVGYDGLGKIRGIDISNTPIFTIYR LVKRHLNEVLKADAVYIACTALSTYEAVQYLHEDLDMPVVSENAAAMWEALNKLKIKAKLPGF >Mature_222_residues PGGRGRIGVILPANNAGMEYDLWKMAPEGVSIHSTRMKPTKGCEPENVEEFEKELKYSYSLLAEVSDIIIYGRTYGTHKH AHVIKRVIKDVVIPEESVYELLKKLNVRKLWIGTPYIKERTLEEVEWWRNKGFEIVGYDGLGKIRGIDISNTPIFTIYRL VKRHLNEVLKADAVYIACTALSTYEAVQYLHEDLDMPVVSENAAAMWEALNKLKIKAKLPGF
Specific function: Unknown
COG id: COG3473
COG function: function code Q; Maleate cis-trans isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25453; Mature: 25322
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGGRGRIGVILPANNAGMEYDLWKMAPEGVSIHSTRMKPTKGCEPENVEEFEKELKYSY CCCCCCCEEEEEECCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHH SLLAEVSDIIIYGRTYGTHKHAHVIKRVIKDVVIPEESVYELLKKLNVRKLWIGTPYIKE HHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCHHHH RTLEEVEWWRNKGFEIVGYDGLGKIRGIDISNTPIFTIYRLVKRHLNEVLKADAVYIACT HHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEH ALSTYEAVQYLHEDLDMPVVSENAAAMWEALNKLKIKAKLPGF HHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHEEEEECCCC >Mature Secondary Structure PGGRGRIGVILPANNAGMEYDLWKMAPEGVSIHSTRMKPTKGCEPENVEEFEKELKYSY CCCCCCEEEEEECCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHH SLLAEVSDIIIYGRTYGTHKHAHVIKRVIKDVVIPEESVYELLKKLNVRKLWIGTPYIKE HHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCHHHH RTLEEVEWWRNKGFEIVGYDGLGKIRGIDISNTPIFTIYRLVKRHLNEVLKADAVYIACT HHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEH ALSTYEAVQYLHEDLDMPVVSENAAAMWEALNKLKIKAKLPGF HHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA