| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15920876
Identifier: 15920876
GI number: 15920876
Start: 639330
End: 640172
Strand: Reverse
Name: 15920876
Synonym: ST0655
Alternate gene names: NA
Gene position: 640172-639330 (Counterclockwise)
Preceding gene: 15920877
Following gene: 15920872
Centisome position: 23.76
GC content: 34.16
Gene sequence:
>843_bases ATGGAACAAGTTAAAAGGTTAAAAATAACGGTCTTAAGCGACAATTTCACTAGCACAATAATTCCTCCGCTAATTGGTGA ATGGGGATTCTCGGCATATATTGAAGCTGATCAGATCAGAATATTATATGATCTAGGAAATTCTGGGTTACCAGTACTTC ACAATGCCAAACTCTTAGGTATAGACTTATCAAAGGTTGATTATGTAGTTTTAAGCCACGGTCATTCAGATCATACTGGT GGTTTAGGAAATAAGGAACTTCTTGAACTTCTAAAGGGAAAAACATTGATTGCACATCCTTCTATCAGCGAGAAGAAGTT TCTAAATTGGAGTGGGAGATTACAATACATAGGATTACCTTTAACAAGGGAGGAATTAGAGAAAAATTTCAATTTAATTC TTACTAAAAAGCCATTAGAGTTTACTAAAGGGGTTATGTTTAGCGGTGAAGTAAAGAGGTACGGATATAAGGAATATAAT TCTGGATTATTTAAGGCATCAGAAGAGGGTATTGAGGAAGATAAATTATATGATGATATTGCATTATTTATAAATACTCC TAGGGGGCTTGTTATTTTAACTGGCTGTGGTCATTCTAATATCCTAAATATTATAAATTATGCAAAAGAAGTTACTGGTG TAAATAAAATATATGCCGTTTTAGGAGGATTTCATTTACTTTCTTCTGATGACCAACATGTTAAGGATGTTATTAATAAG CTTTCTTCTCAAGCTTCTAAAATAGCTCCTGCTCACTGTAGTGGGAATCTCGCTAAGAGCCTCGTCACTAAGGAACAATT CATCGATTTTGGAGTAGGAAAGAGTTTCGAGATATTCGAATGA
Upstream 100 bases:
>100_bases AGAAAATGCTGCTGCAATGTGGGAAGCATTAAATAAATTAAAGATAAAAGCAAAACTTCCAGGGTTTTAGAAATATAAAC TATCAAAAAGAAAAAAGTTT
Downstream 100 bases:
>100_bases GATACTTTCTAGTAATATTCTCCCAATCTTTGCTAAATAATACCTTAGTAAGGGAAGTGAAGAGTAAGGAAGTTTTATTA CTTTCCCACCTTCCACGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MEQVKRLKITVLSDNFTSTIIPPLIGEWGFSAYIEADQIRILYDLGNSGLPVLHNAKLLGIDLSKVDYVVLSHGHSDHTG GLGNKELLELLKGKTLIAHPSISEKKFLNWSGRLQYIGLPLTREELEKNFNLILTKKPLEFTKGVMFSGEVKRYGYKEYN SGLFKASEEGIEEDKLYDDIALFINTPRGLVILTGCGHSNILNIINYAKEVTGVNKIYAVLGGFHLLSSDDQHVKDVINK LSSQASKIAPAHCSGNLAKSLVTKEQFIDFGVGKSFEIFE
Sequences:
>Translated_280_residues MEQVKRLKITVLSDNFTSTIIPPLIGEWGFSAYIEADQIRILYDLGNSGLPVLHNAKLLGIDLSKVDYVVLSHGHSDHTG GLGNKELLELLKGKTLIAHPSISEKKFLNWSGRLQYIGLPLTREELEKNFNLILTKKPLEFTKGVMFSGEVKRYGYKEYN SGLFKASEEGIEEDKLYDDIALFINTPRGLVILTGCGHSNILNIINYAKEVTGVNKIYAVLGGFHLLSSDDQHVKDVINK LSSQASKIAPAHCSGNLAKSLVTKEQFIDFGVGKSFEIFE >Mature_280_residues MEQVKRLKITVLSDNFTSTIIPPLIGEWGFSAYIEADQIRILYDLGNSGLPVLHNAKLLGIDLSKVDYVVLSHGHSDHTG GLGNKELLELLKGKTLIAHPSISEKKFLNWSGRLQYIGLPLTREELEKNFNLILTKKPLEFTKGVMFSGEVKRYGYKEYN SGLFKASEEGIEEDKLYDDIALFINTPRGLVILTGCGHSNILNIINYAKEVTGVNKIYAVLGGFHLLSSDDQHVKDVINK LSSQASKIAPAHCSGNLAKSLVTKEQFIDFGVGKSFEIFE
Specific function: Catalyzes the condensation of 6-hydroxymethyl-7,8- dihydropterin pyrophosphate (DHPP) with 4-(beta-D-ribofuranosyl)- aminobenzene-5'-phosphate (beta-RFA-P) to form 7,8-dihydropterin- 6-methyl-4-(beta-D-ribofuranosyl)-aminobenzene-5'-phosphate, a precursor
COG id: COG1237
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 31070; Mature: 31070
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQVKRLKITVLSDNFTSTIIPPLIGEWGFSAYIEADQIRILYDLGNSGLPVLHNAKLLG CCCCEEEEEEEEECCCCHHHCCHHHHCCCCEEEEECCCEEEEEECCCCCCCEEECCEEEE IDLSKVDYVVLSHGHSDHTGGLGNKELLELLKGKTLIAHPSISEKKFLNWSGRLQYIGLP EEHHHHEEEEEECCCCCCCCCCCCHHHHHHHCCCEEEECCCCCCHHEECCCCCEEEEECC LTREELEKNFNLILTKKPLEFTKGVMFSGEVKRYGYKEYNSGLFKASEEGIEEDKLYDDI CCHHHHHCCCCEEEEECCHHHHCCCEECCCHHHCCCHHHCCCCHHCCCCCCCHHHHHHHE ALFINTPRGLVILTGCGHSNILNIINYAKEVTGVNKIYAVLGGFHLLSSDDQHVKDVINK EEEEECCCCEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCHHHHHHHHH LSSQASKIAPAHCSGNLAKSLVTKEQFIDFGVGKSFEIFE HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCC >Mature Secondary Structure MEQVKRLKITVLSDNFTSTIIPPLIGEWGFSAYIEADQIRILYDLGNSGLPVLHNAKLLG CCCCEEEEEEEEECCCCHHHCCHHHHCCCCEEEEECCCEEEEEECCCCCCCEEECCEEEE IDLSKVDYVVLSHGHSDHTGGLGNKELLELLKGKTLIAHPSISEKKFLNWSGRLQYIGLP EEHHHHEEEEEECCCCCCCCCCCCHHHHHHHCCCEEEECCCCCCHHEECCCCCEEEEECC LTREELEKNFNLILTKKPLEFTKGVMFSGEVKRYGYKEYNSGLFKASEEGIEEDKLYDDI CCHHHHHCCCCEEEEECCHHHHCCCEECCCHHHCCCHHHCCCCHHCCCCCCCHHHHHHHE ALFINTPRGLVILTGCGHSNILNIINYAKEVTGVNKIYAVLGGFHLLSSDDQHVKDVINK EEEEECCCCEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHEECCCCHHHHHHHHH LSSQASKIAPAHCSGNLAKSLVTKEQFIDFGVGKSFEIFE HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]