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The map label for this gene is fccB [H]

Identifier: 15920835

GI number: 15920835

Start: 599543

End: 600697

Strand: Direct

Name: fccB [H]

Synonym: ST0615

Alternate gene names: 15920835

Gene position: 599543-600697 (Clockwise)

Preceding gene: 15920832

Following gene: 15920836

Centisome position: 22.25

GC content: 35.41

Gene sequence:

>1155_bases
ATGAAGAGAGTTATAATTGCTGGAGGAAATATAGCTGGTACAATTGTTGCAAATAGATTAGCTAAAAAGCTAGATGAAGA
GTTAGATAAAGGCGAAGTAGAAATAGTAGTTCTCAATAACACCGATGAACATGTTTACTTACCCGGTCAGTTGTTAGTTG
CTTATGGTTTAGAGAACCCAATAGAACTGAAAAGAAAAGAAAGCGAATTGTTAGATCCTAGGATTAAATTCCTTCATGGA
CAGAAGGGTACTATAACAAAAATAGATGTTGCAAATCACTCAGTTATAACAGCTGACGGTTTGTCTCATTCGTATGATTA
TTTAGTTATAACTACTGGTGTCGAATACACTTGGGATGAGGTCCCTGGTTATAGATCTGCAGCATTATCTCCATATGAGT
TTGACGGAGCATTAAAGATGAGAGAAGCATTAGAAAAATTCCAAGGAGGTACTGTTGTAGTTAATGTAGCTAAGTTGCCT
CATAGATGTCCAGTTGCACCATTAGAAATGACGTTAATACTTGATGATTATTTAAGAAAGAGGGGAATTAGGGATAAGAC
AAAAATAATATACACTTATCCGACTCAAGGAGTATTTGGTAGACCTATAACAAACAAGTTTATGTTAAAATTATTTGAGG
AAAGGGGCATAGAAGTTCATTCGCCATTTAATGTTACTAAAGTAGATCCTAATGAGAAAATTATTGAATCACAAGAAGGT
GGTAAAATTAAGTTCGACCTATTATTAGGTGTACCTCCAAACATGGGTGCTAAAGTTATTGAAGACTCCGGAATTGGTGA
CAGAAGAAGATGGGTACCAACTGATAAATTCACGCTAAGAATGAAAGATCAAAGCAATGTATATGTAATGGGTGATGCAA
CAGATTTACCAGTGTCAAAGGCGGGATCTACAGCTGATTTTGAATCTTATATTGTTGCTCATAACATAGCTAATGATATT
AAAGGAAACATGGGTGTAAAGCACTATGGAGGAGATGTATTATGTTATATAGCTACTGGTACAGATACAGCAACATACAT
TAGATTTAGTTATACAATGAACGAGAATCCACCACCACCTTCATATGTACATTGGTGGGGTAAAATAGGGTATAATAAAT
TATACTGGACTGTAACGGCTAAAGCTGTGGTGTGA

Upstream 100 bases:

>100_bases
AAAAGACATAGAAGCTTTTGTAAAGAAGAAGGGATATAAGATAGTCCAATCCACGCAAGATGGAAAGAATTTTGTACTCC
TAATTACTAGGTGAGAGGAA

Downstream 100 bases:

>100_bases
AATGGCCAAAGTAGGGATTGTTTTAGGTACTAATGAACTTTCAAAAGTCCTATATGCTGGAATGTGGGCTGTAATATCAA
CATCAATGGGAGACGAAGTA

Product: sulfide dehydrogenase flavoprotein subunit

Products: NA

Alternate protein names: FCSD; Flavocytochrome c flavoprotein subunit; FC [H]

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MKRVIIAGGNIAGTIVANRLAKKLDEELDKGEVEIVVLNNTDEHVYLPGQLLVAYGLENPIELKRKESELLDPRIKFLHG
QKGTITKIDVANHSVITADGLSHSYDYLVITTGVEYTWDEVPGYRSAALSPYEFDGALKMREALEKFQGGTVVVNVAKLP
HRCPVAPLEMTLILDDYLRKRGIRDKTKIIYTYPTQGVFGRPITNKFMLKLFEERGIEVHSPFNVTKVDPNEKIIESQEG
GKIKFDLLLGVPPNMGAKVIEDSGIGDRRRWVPTDKFTLRMKDQSNVYVMGDATDLPVSKAGSTADFESYIVAHNIANDI
KGNMGVKHYGGDVLCYIATGTDTATYIRFSYTMNENPPPPSYVHWWGKIGYNKLYWTVTAKAVV

Sequences:

>Translated_384_residues
MKRVIIAGGNIAGTIVANRLAKKLDEELDKGEVEIVVLNNTDEHVYLPGQLLVAYGLENPIELKRKESELLDPRIKFLHG
QKGTITKIDVANHSVITADGLSHSYDYLVITTGVEYTWDEVPGYRSAALSPYEFDGALKMREALEKFQGGTVVVNVAKLP
HRCPVAPLEMTLILDDYLRKRGIRDKTKIIYTYPTQGVFGRPITNKFMLKLFEERGIEVHSPFNVTKVDPNEKIIESQEG
GKIKFDLLLGVPPNMGAKVIEDSGIGDRRRWVPTDKFTLRMKDQSNVYVMGDATDLPVSKAGSTADFESYIVAHNIANDI
KGNMGVKHYGGDVLCYIATGTDTATYIRFSYTMNENPPPPSYVHWWGKIGYNKLYWTVTAKAVV
>Mature_384_residues
MKRVIIAGGNIAGTIVANRLAKKLDEELDKGEVEIVVLNNTDEHVYLPGQLLVAYGLENPIELKRKESELLDPRIKFLHG
QKGTITKIDVANHSVITADGLSHSYDYLVITTGVEYTWDEVPGYRSAALSPYEFDGALKMREALEKFQGGTVVVNVAKLP
HRCPVAPLEMTLILDDYLRKRGIRDKTKIIYTYPTQGVFGRPITNKFMLKLFEERGIEVHSPFNVTKVDPNEKIIESQEG
GKIKFDLLLGVPPNMGAKVIEDSGIGDRRRWVPTDKFTLRMKDQSNVYVMGDATDLPVSKAGSTADFESYIVAHNIANDI
KGNMGVKHYGGDVLCYIATGTDTATYIRFSYTMNENPPPPSYVHWWGKIGYNKLYWTVTAKAVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI10864011, Length=347, Percent_Identity=24.7838616714697, Blast_Score=120, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI115534373, Length=275, Percent_Identity=27.2727272727273, Blast_Score=101, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17539680, Length=392, Percent_Identity=22.9591836734694, Blast_Score=95, Evalue=6e-20,
Organism=Drosophila melanogaster, GI24657386, Length=348, Percent_Identity=26.1494252873563, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24657391, Length=348, Percent_Identity=26.1494252873563, Blast_Score=116, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016156
- InterPro:   IPR013027
- InterPro:   IPR015323
- InterPro:   IPR015904
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09242 FCSD-flav_bind; PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 42916; Mature: 42916

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVIIAGGNIAGTIVANRLAKKLDEELDKGEVEIVVLNNTDEHVYLPGQLLVAYGLENP
CCEEEEECCCEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCEEEEEECCCCC
IELKRKESELLDPRIKFLHGQKGTITKIDVANHSVITADGLSHSYDYLVITTGVEYTWDE
HHHHHHHHHHCCCHHHEEECCCCCEEEEEECCCEEEEECCCCCCCCEEEEECCCEEECCC
VPGYRSAALSPYEFDGALKMREALEKFQGGTVVVNVAKLPHRCPVAPLEMTLILDDYLRK
CCCCHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEEHHHHHHH
RGIRDKTKIIYTYPTQGVFGRPITNKFMLKLFEERGIEVHSPFNVTKVDPNEKIIESQEG
CCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEECCEEEEEECCCHHHHCCCCC
GKIKFDLLLGVPPNMGAKVIEDSGIGDRRRWVPTDKFTLRMKDQSNVYVMGDATDLPVSK
CEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCC
AGSTADFESYIVAHNIANDIKGNMGVKHYGGDVLCYIATGTDTATYIRFSYTMNENPPPP
CCCCCCHHHEEEEHHHHHHHCCCCCEEEECCCEEEEEEECCCCEEEEEEEEEECCCCCCC
SYVHWWGKIGYNKLYWTVTAKAVV
CCEEEEECCCCCEEEEEEEEEEEC
>Mature Secondary Structure
MKRVIIAGGNIAGTIVANRLAKKLDEELDKGEVEIVVLNNTDEHVYLPGQLLVAYGLENP
CCEEEEECCCEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCEEEEEECCCCC
IELKRKESELLDPRIKFLHGQKGTITKIDVANHSVITADGLSHSYDYLVITTGVEYTWDE
HHHHHHHHHHCCCHHHEEECCCCCEEEEEECCCEEEEECCCCCCCCEEEEECCCEEECCC
VPGYRSAALSPYEFDGALKMREALEKFQGGTVVVNVAKLPHRCPVAPLEMTLILDDYLRK
CCCCHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEEHHHHHHH
RGIRDKTKIIYTYPTQGVFGRPITNKFMLKLFEERGIEVHSPFNVTKVDPNEKIIESQEG
CCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEECCEEEEEECCCHHHHCCCCC
GKIKFDLLLGVPPNMGAKVIEDSGIGDRRRWVPTDKFTLRMKDQSNVYVMGDATDLPVSK
CEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCC
AGSTADFESYIVAHNIANDIKGNMGVKHYGGDVLCYIATGTDTATYIRFSYTMNENPPPP
CCCCCCHHHEEEEHHHHHHHCCCCCEEEECCCEEEEEEECCCCEEEEEEEEEECCCCCCC
SYVHWWGKIGYNKLYWTVTAKAVV
CCEEEEECCCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8390993; 1649169; 7939681 [H]