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The map label for this gene is glf [C]

Identifier: 15920768

GI number: 15920768

Start: 542996

End: 544549

Strand: Reverse

Name: glf [C]

Synonym: ST0549

Alternate gene names: 15920768

Gene position: 544549-542996 (Counterclockwise)

Preceding gene: 15920771

Following gene: 15920767

Centisome position: 20.21

GC content: 34.04

Gene sequence:

>1554_bases
GTGAATAGAATTTACGATGTAGTAATTATAGGTGGAGGTCATAATGGTTTAGTTGCAGCATCCTACTTAGCGAAAGAAGG
TTTGAAAGTTGCAGTATTTGAAAGAAGAAACGTTATAGGTGGTGCAACAGTAACTGAAGAATTATGGCCTGGAATTAAAG
TTTCCACAGCATCATATGTCTTTAGCTTATTTAGAAAAAAGATAATCGACGATCTAAGACTATATGATTTCGGGCTGAAA
GTATATTTAAAAGACCCAAGTCTGTTTGTCCCTTTTGGACAGAACAAGAGCATAACTATTTGGACTTCAACTAAGAAAAC
AGTAAAAGAAATTGAAAAGTTTTCAAAAAAAGATGCCCAGTCTTATGAAAAATTCGTAAAAATTCTAGAAATTTTCTCAG
AGATAGCAGATTTCTTAATATTAAATAAACCAATAAACCTCTCTGAAGCAGAAGAATTACTTAAATTATTTAAAGGTTTA
AACGTGGACGAAAACACAGCATTGACTATTGCGAGGATGTTTTTCCAGGACGGGAAGTCATTCCTAGATGAATTCTTCGA
AAGTGAAGAAGTAAAATCAGCCTTGATAGAAGATTCTGTTGTAGGAACTTACGCTTCTCCCTCTACTCCTGGTACGGCTT
ATGTATTACTTCATCATAATTTCGGAGAGGTTAATGGAGTTAAAGGAGCTTGGGGTTATGTGGAAGGAGGAATGGGAAAT
GTATCCAATGCTCTTAGGAGGGTTGCAGAATATTATGGTGCAGAAATTTTTCTTAACTCAGAAGTTGATGAGATAATTGT
TAAAAATGGTGAGGCTAAAGGAATAAAATTAAAAAACGGAAAAATAATAGAGAGTAAAATAGTTCTTTCTAATGCTGATC
CCAAGACTACATTTCTTAAACTATTAAGAAATGCTGAATTAGATGAAGAATTCATTAGAAAAGTAAATGCACTTAAGACT
ATCGGTGTATCATTTAAGATAAACGGATACATAGAAGAACTCCCAGATTTTGGAAATGGAAAATCATTAAGACCAGAGCA
TATAGCTTCAGAACTAATTATACCCTCTGTAAGTTACGTAGAAAAAGCATATTTAGATGCAAAAAATTTGGGCTATTCCA
GAGAACCATGGTTATCAATTAACATCCCATCAACTGTGGATCCTACGTTAGCACCTCAAGGGAAGTTTGTCTTCACAATT
TTCGGCCAATATGTACCTTATAGTAAAGATCTTGATAAGATTAAAGATAAGATAGCAGAAATCAGTATTGAAAAAGTTAG
AGAATTTGCACCCAATTTTAAGCCTATTAAATACGAAATATTAACGCCTCTAGATATTGAAAGAAGATTTGGAATATGGG
AAGGGAATATATTTCATCTTGACATGACACCAGACCAATTATACTTCTTTAGACCTCTGATAGGATATTCTAATTATAGG
ACTCCAATAAAGAACCTATATCTGTGTGGATCTGGGACTCATCCAGGTGGTGGTGTTACTGGAGCACCAGGATATAATGC
CTCTATGGAGATTTTGAAAGACATAAAACATTGA

Upstream 100 bases:

>100_bases
TAAATGAACCCAACAGAAATGTTATTGGTTTTCGCGTATACAGCAGTAGGTTTATCTGTATTGGGTGCTATACTAGCAAT
AGTATTTAGAATTAAAAGAG

Downstream 100 bases:

>100_bases
CTATAATTTAAATATTTGCAAATTCATAATGTTTTTTGAACATGGGAGTTACTCAATTTATTCCATTAATAGAGGTTCTT
GGTGCTGTTGGAATTACAAT

Product: hypothetical protein

Products: UDP-D-galacto-1,4-furanose [C]

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MNRIYDVVIIGGGHNGLVAASYLAKEGLKVAVFERRNVIGGATVTEELWPGIKVSTASYVFSLFRKKIIDDLRLYDFGLK
VYLKDPSLFVPFGQNKSITIWTSTKKTVKEIEKFSKKDAQSYEKFVKILEIFSEIADFLILNKPINLSEAEELLKLFKGL
NVDENTALTIARMFFQDGKSFLDEFFESEEVKSALIEDSVVGTYASPSTPGTAYVLLHHNFGEVNGVKGAWGYVEGGMGN
VSNALRRVAEYYGAEIFLNSEVDEIIVKNGEAKGIKLKNGKIIESKIVLSNADPKTTFLKLLRNAELDEEFIRKVNALKT
IGVSFKINGYIEELPDFGNGKSLRPEHIASELIIPSVSYVEKAYLDAKNLGYSREPWLSINIPSTVDPTLAPQGKFVFTI
FGQYVPYSKDLDKIKDKIAEISIEKVREFAPNFKPIKYEILTPLDIERRFGIWEGNIFHLDMTPDQLYFFRPLIGYSNYR
TPIKNLYLCGSGTHPGGGVTGAPGYNASMEILKDIKH

Sequences:

>Translated_517_residues
MNRIYDVVIIGGGHNGLVAASYLAKEGLKVAVFERRNVIGGATVTEELWPGIKVSTASYVFSLFRKKIIDDLRLYDFGLK
VYLKDPSLFVPFGQNKSITIWTSTKKTVKEIEKFSKKDAQSYEKFVKILEIFSEIADFLILNKPINLSEAEELLKLFKGL
NVDENTALTIARMFFQDGKSFLDEFFESEEVKSALIEDSVVGTYASPSTPGTAYVLLHHNFGEVNGVKGAWGYVEGGMGN
VSNALRRVAEYYGAEIFLNSEVDEIIVKNGEAKGIKLKNGKIIESKIVLSNADPKTTFLKLLRNAELDEEFIRKVNALKT
IGVSFKINGYIEELPDFGNGKSLRPEHIASELIIPSVSYVEKAYLDAKNLGYSREPWLSINIPSTVDPTLAPQGKFVFTI
FGQYVPYSKDLDKIKDKIAEISIEKVREFAPNFKPIKYEILTPLDIERRFGIWEGNIFHLDMTPDQLYFFRPLIGYSNYR
TPIKNLYLCGSGTHPGGGVTGAPGYNASMEILKDIKH
>Mature_517_residues
MNRIYDVVIIGGGHNGLVAASYLAKEGLKVAVFERRNVIGGATVTEELWPGIKVSTASYVFSLFRKKIIDDLRLYDFGLK
VYLKDPSLFVPFGQNKSITIWTSTKKTVKEIEKFSKKDAQSYEKFVKILEIFSEIADFLILNKPINLSEAEELLKLFKGL
NVDENTALTIARMFFQDGKSFLDEFFESEEVKSALIEDSVVGTYASPSTPGTAYVLLHHNFGEVNGVKGAWGYVEGGMGN
VSNALRRVAEYYGAEIFLNSEVDEIIVKNGEAKGIKLKNGKIIESKIVLSNADPKTTFLKLLRNAELDEEFIRKVNALKT
IGVSFKINGYIEELPDFGNGKSLRPEHIASELIIPSVSYVEKAYLDAKNLGYSREPWLSINIPSTVDPTLAPQGKFVFTI
FGQYVPYSKDLDKIKDKIAEISIEKVREFAPNFKPIKYEILTPLDIERRFGIWEGNIFHLDMTPDQLYFFRPLIGYSNYR
TPIKNLYLCGSGTHPGGGVTGAPGYNASMEILKDIKH

Specific function: Involved In The Conversion Of UDP-Galp Into UDP-Galf Through A 2-Keto Intermediate. [C]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI229577391, Length=547, Percent_Identity=40.4021937842779, Blast_Score=392, Evalue=1e-109,
Organism=Caenorhabditis elegans, GI17540238, Length=530, Percent_Identity=42.8301886792453, Blast_Score=400, Evalue=1e-112,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.4.99.9 [C]

Molecular weight: Translated: 57966; Mature: 57966

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRIYDVVIIGGGHNGLVAASYLAKEGLKVAVFERRNVIGGATVTEELWPGIKVSTASYV
CCCEEEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHCCCCEEHHHHHH
FSLFRKKIIDDLRLYDFGLKVYLKDPSLFVPFGQNKSITIWTSTKKTVKEIEKFSKKDAQ
HHHHHHHHHHHHHEEEECEEEEEECCCEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHH
SYEKFVKILEIFSEIADFLILNKPINLSEAEELLKLFKGLNVDENTALTIARMFFQDGKS
HHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHH
FLDEFFESEEVKSALIEDSVVGTYASPSTPGTAYVLLHHNFGEVNGVKGAWGYVEGGMGN
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCH
VSNALRRVAEYYGAEIFLNSEVDEIIVKNGEAKGIKLKNGKIIESKIVLSNADPKTTFLK
HHHHHHHHHHHCCCEEEECCCHHHHHHCCCCCCCEEECCCEEEEEEEEEECCCCHHHHHH
LLRNAELDEEFIRKVNALKTIGVSFKINGYIEELPDFGNGKSLRPEHIASELIIPSVSYV
HHHCCCCCHHHHHHHHHHHHCCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHH
EKAYLDAKNLGYSREPWLSINIPSTVDPTLAPQGKFVFTIFGQYVPYSKDLDKIKDKIAE
HHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH
ISIEKVREFAPNFKPIKYEILTPLDIERRFGIWEGNIFHLDMTPDQLYFFRPLIGYSNYR
HHHHHHHHHCCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCCCCC
TPIKNLYLCGSGTHPGGGVTGAPGYNASMEILKDIKH
CCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MNRIYDVVIIGGGHNGLVAASYLAKEGLKVAVFERRNVIGGATVTEELWPGIKVSTASYV
CCCEEEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHCCCCEEHHHHHH
FSLFRKKIIDDLRLYDFGLKVYLKDPSLFVPFGQNKSITIWTSTKKTVKEIEKFSKKDAQ
HHHHHHHHHHHHHEEEECEEEEEECCCEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHH
SYEKFVKILEIFSEIADFLILNKPINLSEAEELLKLFKGLNVDENTALTIARMFFQDGKS
HHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHH
FLDEFFESEEVKSALIEDSVVGTYASPSTPGTAYVLLHHNFGEVNGVKGAWGYVEGGMGN
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCH
VSNALRRVAEYYGAEIFLNSEVDEIIVKNGEAKGIKLKNGKIIESKIVLSNADPKTTFLK
HHHHHHHHHHHCCCEEEECCCHHHHHHCCCCCCCEEECCCEEEEEEEEEECCCCHHHHHH
LLRNAELDEEFIRKVNALKTIGVSFKINGYIEELPDFGNGKSLRPEHIASELIIPSVSYV
HHHCCCCCHHHHHHHHHHHHCCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHH
EKAYLDAKNLGYSREPWLSINIPSTVDPTLAPQGKFVFTIFGQYVPYSKDLDKIKDKIAE
HHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH
ISIEKVREFAPNFKPIKYEILTPLDIERRFGIWEGNIFHLDMTPDQLYFFRPLIGYSNYR
HHHHHHHHHCCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCCCCC
TPIKNLYLCGSGTHPGGGVTGAPGYNASMEILKDIKH
CCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FAD. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: UDPgalactose [C]

Specific reaction: UDPgalactose --> UDP-D-galacto-1,4-furanose [C]

General reaction: Group transfer (intramolecular Isomerization) [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]