| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is 15920747
Identifier: 15920747
GI number: 15920747
Start: 527260
End: 528009
Strand: Direct
Name: 15920747
Synonym: ST0530
Alternate gene names: NA
Gene position: 527260-528009 (Clockwise)
Preceding gene: 15920745
Following gene: 15920748
Centisome position: 19.57
GC content: 31.73
Gene sequence:
>750_bases ATGACAGATATTGAAATTATCGTTCCCCTAAATATTTCTGGAATCTGGTATCCAGTTTATACTGAAGATATAAGGTATAC TGGGTCTATAGGCTTATCATTGGTATTAAATCCGCCAATAATCGCTTTTCCTAAAAAAGGCGAACCAGAAATTTATTTTA ATAATCAACGTGTGAATTTTCCAAATTTAAAGTATCTAAGTCTTTTAGCTAATGTAAAACTTTATATCCAATCTGAAGTA CCTTTAGGTTTCGGCTACGGGCTTAGTGGTGCAATAAGTTTAGCTTATGCTCTAGCTTCTTATGAATTGTATAACATAAA ATTAGAAGATGCACTTGTGGTTGCTCATGAAAGCGAAATATTTACTAATAATGGACTCGGTGATTTAATCTCTGAATATT ATGGCGGAGGATTAGTTTATAGAAAGAAGCCCGGTGCTCCAGGATATGGAGAAGTAGAAAAAATTATAGTTGAATGGGAG CCAATTTGTAGTAAACCTTTATCAAAAGAATCTACAGAGAAATTAATAAAAAATAAAAATGATAATGCGCTAGTATATAT AAACCAGTTTTTACATAATCCTTCTTTATTAAAGTTCTTTGACTTATCAAGGAAATTTACTGAAGAGATCGGATTTATAT CCCCTTTTCCAAACTCTTTCAGAAAGAAAGGTTTAATACTTAGATTAAAAGAATGTGAAGAAGGATGGATAAAACACACA CCAGCAATACATGGAGCTTACATTCGTTAA
Upstream 100 bases:
>100_bases TGATTTCAATAGTAGTCAAAGCCCTACTAAAGATTGATGCATCAGTAACTCTCATCCACAATAATTAAAAATATAAAGTA ATAAATGTTTTCCTAAATAG
Downstream 100 bases:
>100_bases TCCCAGAAAATCATCCTAGAAAAGAATCTCTCATAATAAGAGAAAAAATAGTGGATGGTTTATTAGATGGCTATGTTGCG CCCCAAGGATTAATTGCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MTDIEIIVPLNISGIWYPVYTEDIRYTGSIGLSLVLNPPIIAFPKKGEPEIYFNNQRVNFPNLKYLSLLANVKLYIQSEV PLGFGYGLSGAISLAYALASYELYNIKLEDALVVAHESEIFTNNGLGDLISEYYGGGLVYRKKPGAPGYGEVEKIIVEWE PICSKPLSKESTEKLIKNKNDNALVYINQFLHNPSLLKFFDLSRKFTEEIGFISPFPNSFRKKGLILRLKECEEGWIKHT PAIHGAYIR
Sequences:
>Translated_249_residues MTDIEIIVPLNISGIWYPVYTEDIRYTGSIGLSLVLNPPIIAFPKKGEPEIYFNNQRVNFPNLKYLSLLANVKLYIQSEV PLGFGYGLSGAISLAYALASYELYNIKLEDALVVAHESEIFTNNGLGDLISEYYGGGLVYRKKPGAPGYGEVEKIIVEWE PICSKPLSKESTEKLIKNKNDNALVYINQFLHNPSLLKFFDLSRKFTEEIGFISPFPNSFRKKGLILRLKECEEGWIKHT PAIHGAYIR >Mature_248_residues TDIEIIVPLNISGIWYPVYTEDIRYTGSIGLSLVLNPPIIAFPKKGEPEIYFNNQRVNFPNLKYLSLLANVKLYIQSEVP LGFGYGLSGAISLAYALASYELYNIKLEDALVVAHESEIFTNNGLGDLISEYYGGGLVYRKKPGAPGYGEVEKIIVEWEP ICSKPLSKESTEKLIKNKNDNALVYINQFLHNPSLLKFFDLSRKFTEEIGFISPFPNSFRKKGLILRLKECEEGWIKHTP AIHGAYIR
Specific function: Unknown
COG id: COG1829
COG function: function code R; Predicted archaeal kinase (sugar kinase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012043 - InterPro: IPR006204 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF00288 GHMP_kinases_N [H]
EC number: NA
Molecular weight: Translated: 28130; Mature: 27999
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIEIIVPLNISGIWYPVYTEDIRYTGSIGLSLVLNPPIIAFPKKGEPEIYFNNQRVNF CCCEEEEEEECCCEEEEEEEECCEEEECCCCEEEEECCCEEEECCCCCCCEEECCEECCC PNLKYLSLLANVKLYIQSEVPLGFGYGLSGAISLAYALASYELYNIKLEDALVVAHESEI CCHHHHHHHHCEEEEEEECCCCEECCCHHHHHHHHHHHHHEEEEEEEECCEEEEEECCCE FTNNGLGDLISEYYGGGLVYRKKPGAPGYGEVEKIIVEWEPICSKPLSKESTEKLIKNKN EECCCHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEEECCHHHCCCCCHHHHHHHHHCCC DNALVYINQFLHNPSLLKFFDLSRKFTEEIGFISPFPNSFRKKGLILRLKECEEGWIKHT CCEEEEEEHHHCCCCCEEHHHHHHHHHHHCCCCCCCCHHHHHCCEEEEEECCCCCHHCCC PAIHGAYIR CCCCCEECC >Mature Secondary Structure TDIEIIVPLNISGIWYPVYTEDIRYTGSIGLSLVLNPPIIAFPKKGEPEIYFNNQRVNF CCEEEEEEECCCEEEEEEEECCEEEECCCCEEEEECCCEEEECCCCCCCEEECCEECCC PNLKYLSLLANVKLYIQSEVPLGFGYGLSGAISLAYALASYELYNIKLEDALVVAHESEI CCHHHHHHHHCEEEEEEECCCCEECCCHHHHHHHHHHHHHEEEEEEEECCEEEEEECCCE FTNNGLGDLISEYYGGGLVYRKKPGAPGYGEVEKIIVEWEPICSKPLSKESTEKLIKNKN EECCCHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEEECCHHHCCCCCHHHHHHHHHCCC DNALVYINQFLHNPSLLKFFDLSRKFTEEIGFISPFPNSFRKKGLILRLKECEEGWIKHT CCEEEEEEHHHCCCCCEEHHHHHHHHHHHCCCCCCCCHHHHHCCEEEEEECCCCCHHCCC PAIHGAYIR CCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]