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The map label for this gene is hdrB2 [H]

Identifier: 15920715

GI number: 15920715

Start: 498087

End: 498959

Strand: Direct

Name: hdrB2 [H]

Synonym: ST0499

Alternate gene names: 15920715

Gene position: 498087-498959 (Clockwise)

Preceding gene: 15920714

Following gene: 15920716

Centisome position: 18.48

GC content: 35.05

Gene sequence:

>873_bases
ATGAGCTATGCGTATTATCCAGGTTGTGCAACTCATGGGCTTTCTAAAGATGTAGATATCGCAACAAGAAAAGTATTCGA
AACCTTAGGGTTAAAGCTAGAAGAAGTGAAAGATTGGAACTGTTGTGGAGGAGGATTCTATGATGAATATGATGAAGTTG
GACATGTTGCCTTAAATCTTAGGAATTTATCAATAGTGGAAAAAATGGGATATAATAAAATGATTACTCCTTGTAGTGTT
TGTCTTCATAGCCATAGGTTAGCTGCATATAAGTTTAAGGAAAATAAAGATATAAGAAAAAAAGTCGAGGAAAGAATTAA
GGGTACTTCAATTAACTATTCTGGAAAAGCTAATGCTGAACATATAGTATGGGTTCTTGTTAGAGATATAGGAATTCAGA
AAATCAAGGAAAAAGTAAAAAGACCATTAACTGGATTAAGAGTTGCAGCATATTATGGATGTCAGATGTTAAGACCAGAG
GAGATAATGGGTTTTGAACCGGCATTTAATCCTCATAGTATGGAAGATTTGATTTCGGCTACTGGTGCAATTCCAGTAAC
GTTTCCTAATGCTAGGTCGTGTTGCGGTTTTCCTTTAATGGGTAGTAATCCTAACGTGGGAATAAAAATGGCATATAATG
TGCTGAAAAGTGCAAAAGATCAAGAAGCAGACCTTTTAGTTCATCCTTGTAGCTTGTGTCATTTACAGCTAGACTCACTA
CAACTTAAAATAAAGGCTGAGTTTAATACTAATTGGACTCTTCCTGCAATATATGTAACTCAATTACTAGGTTTAGCGTT
CGGTTTTTCACCAGATGAACTAGGTATAAGTAATCTGGCTAAACAAGTTCTAATTTCGAAGGGTGTAGTTTAA

Upstream 100 bases:

>100_bases
TTTATCTTTTCCAATCTGGTAAAGTTAAGTATGCTTTAGTAAAAGAGAAACCAGTTGAAAATATAAGTGAGGTCAGGAAA
ATTCTTAGTGGTGATAATAA

Downstream 100 bases:

>100_bases
TGTCGTATGAAGACAGGATTAGCGATACACTAACAAAAATAGGAGCTACTATAACAAGAGGTTGGTATTCAGTAAGTGAG
AGACCAGAGAGACCTCCTTT

Product: succinate dehydrogenase subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MSYAYYPGCATHGLSKDVDIATRKVFETLGLKLEEVKDWNCCGGGFYDEYDEVGHVALNLRNLSIVEKMGYNKMITPCSV
CLHSHRLAAYKFKENKDIRKKVEERIKGTSINYSGKANAEHIVWVLVRDIGIQKIKEKVKRPLTGLRVAAYYGCQMLRPE
EIMGFEPAFNPHSMEDLISATGAIPVTFPNARSCCGFPLMGSNPNVGIKMAYNVLKSAKDQEADLLVHPCSLCHLQLDSL
QLKIKAEFNTNWTLPAIYVTQLLGLAFGFSPDELGISNLAKQVLISKGVV

Sequences:

>Translated_290_residues
MSYAYYPGCATHGLSKDVDIATRKVFETLGLKLEEVKDWNCCGGGFYDEYDEVGHVALNLRNLSIVEKMGYNKMITPCSV
CLHSHRLAAYKFKENKDIRKKVEERIKGTSINYSGKANAEHIVWVLVRDIGIQKIKEKVKRPLTGLRVAAYYGCQMLRPE
EIMGFEPAFNPHSMEDLISATGAIPVTFPNARSCCGFPLMGSNPNVGIKMAYNVLKSAKDQEADLLVHPCSLCHLQLDSL
QLKIKAEFNTNWTLPAIYVTQLLGLAFGFSPDELGISNLAKQVLISKGVV
>Mature_289_residues
SYAYYPGCATHGLSKDVDIATRKVFETLGLKLEEVKDWNCCGGGFYDEYDEVGHVALNLRNLSIVEKMGYNKMITPCSVC
LHSHRLAAYKFKENKDIRKKVEERIKGTSINYSGKANAEHIVWVLVRDIGIQKIKEKVKRPLTGLRVAAYYGCQMLRPEE
IMGFEPAFNPHSMEDLISATGAIPVTFPNARSCCGFPLMGSNPNVGIKMAYNVLKSAKDQEADLLVHPCSLCHLQLDSLQ
LKIKAEFNTNWTLPAIYVTQLLGLAFGFSPDELGISNLAKQVLISKGVV

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrB may have a function in energy transduction [H]

COG id: COG2048

COG function: function code C; Heterodisulfide reductase, subunit B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hdrB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017678
- InterPro:   IPR004017 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 32253; Mature: 32122

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYAYYPGCATHGLSKDVDIATRKVFETLGLKLEEVKDWNCCGGGFYDEYDEVGHVALNL
CCCEECCCHHHCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHCEEEEEE
RNLSIVEKMGYNKMITPCSVCLHSHRLAAYKFKENKDIRKKVEERIKGTSINYSGKANAE
HHHHHHHHCCCCCCCCHHHHHHHHCHHEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCC
HIVWVLVRDIGIQKIKEKVKRPLTGLRVAAYYGCQMLRPEEIMGFEPAFNPHSMEDLISA
CEEEEHHHHHCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHHHH
TGAIPVTFPNARSCCGFPLMGSNPNVGIKMAYNVLKSAKDQEADLLVHPCSLCHLQLDSL
CCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECHHHHHEEECCE
QLKIKAEFNTNWTLPAIYVTQLLGLAFGFSPDELGISNLAKQVLISKGVV
EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SYAYYPGCATHGLSKDVDIATRKVFETLGLKLEEVKDWNCCGGGFYDEYDEVGHVALNL
CCEECCCHHHCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHCEEEEEE
RNLSIVEKMGYNKMITPCSVCLHSHRLAAYKFKENKDIRKKVEERIKGTSINYSGKANAE
HHHHHHHHCCCCCCCCHHHHHHHHCHHEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCC
HIVWVLVRDIGIQKIKEKVKRPLTGLRVAAYYGCQMLRPEEIMGFEPAFNPHSMEDLISA
CEEEEHHHHHCHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHHHH
TGAIPVTFPNARSCCGFPLMGSNPNVGIKMAYNVLKSAKDQEADLLVHPCSLCHLQLDSL
CCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECHHHHHEEECCE
QLKIKAEFNTNWTLPAIYVTQLLGLAFGFSPDELGISNLAKQVLISKGVV
EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]