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The map label for this gene is rpl15e

Identifier: 15920662

GI number: 15920662

Start: 454467

End: 455114

Strand: Reverse

Name: rpl15e

Synonym: ST0450

Alternate gene names: 15920662

Gene position: 455114-454467 (Counterclockwise)

Preceding gene: 15920664

Following gene: 15920661

Centisome position: 16.89

GC content: 36.57

Gene sequence:

>648_bases
ATGACATCATCTATGTATAATTATATAGAACAAACATGGCAGTCTGATGAGTGGAAAAAAGTGTTACGACAAAGATTAAT
AGAGTGGAGAAAGAGTCCAGCTGTTGAGAGAATAGACAAGCCCACAAGGTTAAATAGAGCTAGAGCAATAGGTTATAAGG
CTAAACAAGGTTTCGTTGTGGTCAGAGTTAGAGTAAGAAGAGGAGGACTAAATAAGCCTAGACCAAACAGTGGGAGAAGG
CCAAAAAGAATGGGAGTTTATGGTTATTCTCCAGCTAAAGGATATAGATGGATAGCAGAGGAGAAAGCTGCAAGAAAGTT
CCCTAATTTAGAAGTCTTAGGTAGTTATTACGTTGGCGAGGATGGAATGTATAAATATTATGAGATTATTATGGTTGATC
CAAATCACCCCGTAATAAAGTCGGATCCAAACTTAAAGTGGTTACAAGATCCTGCTAATAGAAAGAGAGTATTTAGAGGT
CTAACTAGTGCTGGAAAGAAAGCTAGAGGTTTATTAAAGAGTAGAGGACTTAAGGGTACTGTAAAGCATAAGTGGAAGAA
AAAAGAAAAAGAAAGAGAACAAAAGAAGAGACATGAAGCAACTAAGTATTATAGGCTTCAAAACTACGATAAATTACCTG
GGAAATGA

Upstream 100 bases:

>100_bases
ACCTACATTGGTTTTTCCAATTAAACCAATAGTTATCATTCATGATAATGTGGAGAAACACATTTATTAAGTAGTTGCTC
ATTTTAACATTAGGAGAATA

Downstream 100 bases:

>100_bases
AACTCTCAAACTTATCTATTATAATTTTTTGTCATGAGACTGAAAATAAAGATAAAATTTTAGTGGCTTTGGGAGATTTT
TTTGGAAGTATTTTAAAATC

Product: 50S ribosomal protein L15e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MTSSMYNYIEQTWQSDEWKKVLRQRLIEWRKSPAVERIDKPTRLNRARAIGYKAKQGFVVVRVRVRRGGLNKPRPNSGRR
PKRMGVYGYSPAKGYRWIAEEKAARKFPNLEVLGSYYVGEDGMYKYYEIIMVDPNHPVIKSDPNLKWLQDPANRKRVFRG
LTSAGKKARGLLKSRGLKGTVKHKWKKKEKEREQKKRHEATKYYRLQNYDKLPGK

Sequences:

>Translated_215_residues
MTSSMYNYIEQTWQSDEWKKVLRQRLIEWRKSPAVERIDKPTRLNRARAIGYKAKQGFVVVRVRVRRGGLNKPRPNSGRR
PKRMGVYGYSPAKGYRWIAEEKAARKFPNLEVLGSYYVGEDGMYKYYEIIMVDPNHPVIKSDPNLKWLQDPANRKRVFRG
LTSAGKKARGLLKSRGLKGTVKHKWKKKEKEREQKKRHEATKYYRLQNYDKLPGK
>Mature_214_residues
TSSMYNYIEQTWQSDEWKKVLRQRLIEWRKSPAVERIDKPTRLNRARAIGYKAKQGFVVVRVRVRRGGLNKPRPNSGRRP
KRMGVYGYSPAKGYRWIAEEKAARKFPNLEVLGSYYVGEDGMYKYYEIIMVDPNHPVIKSDPNLKWLQDPANRKRVFRGL
TSAGKKARGLLKSRGLKGTVKHKWKKKEKEREQKKRHEATKYYRLQNYDKLPGK

Specific function: Unknown

COG id: COG1632

COG function: function code J; Ribosomal protein L15E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L15e family

Homologues:

Organism=Homo sapiens, GI15431293, Length=181, Percent_Identity=43.0939226519337, Blast_Score=152, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI17541432, Length=203, Percent_Identity=41.871921182266, Blast_Score=127, Evalue=4e-30,
Organism=Saccharomyces cerevisiae, GI6323057, Length=180, Percent_Identity=42.2222222222222, Blast_Score=141, Evalue=8e-35,
Organism=Saccharomyces cerevisiae, GI6323769, Length=174, Percent_Identity=41.9540229885057, Blast_Score=139, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL15E_SULTO (Q975G1)

Other databases:

- EMBL:   BA000023
- RefSeq:   NP_376331.1
- ProteinModelPortal:   Q975G1
- SMR:   Q975G1
- GeneID:   1458387
- GenomeReviews:   BA000023_GR
- KEGG:   sto:ST0450
- NMPDR:   fig|273063.1.peg.499
- HOGENOM:   HBG577798
- OMA:   KWYEVIL
- ProtClustDB:   PRK04243
- BioCyc:   STOK273063:ST0450-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00256
- InterPro:   IPR000439
- InterPro:   IPR020926
- InterPro:   IPR020925
- InterPro:   IPR012678
- Gene3D:   G3DSA:3.40.1120.10
- PANTHER:   PTHR11847

Pfam domain/function: PF00827 Ribosomal_L15e; SSF54189 L23_L15e_core

EC number: NA

Molecular weight: Translated: 25430; Mature: 25299

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: PS01194 RIBOSOMAL_L15E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSMYNYIEQTWQSDEWKKVLRQRLIEWRKSPAVERIDKPTRLNRARAIGYKAKQGFVV
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHCCCCCCCEEE
VRVRVRRGGLNKPRPNSGRRPKRMGVYGYSPAKGYRWIAEEKAARKFPNLEVLGSYYVGE
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECEEECC
DGMYKYYEIIMVDPNHPVIKSDPNLKWLQDPANRKRVFRGLTSAGKKARGLLKSRGLKGT
CCCEEEEEEEEECCCCCEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
VKHKWKKKEKEREQKKRHEATKYYRLQNYDKLPGK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TSSMYNYIEQTWQSDEWKKVLRQRLIEWRKSPAVERIDKPTRLNRARAIGYKAKQGFVV
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHCCCCCCCEEE
VRVRVRRGGLNKPRPNSGRRPKRMGVYGYSPAKGYRWIAEEKAARKFPNLEVLGSYYVGE
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECEEECC
DGMYKYYEIIMVDPNHPVIKSDPNLKWLQDPANRKRVFRGLTSAGKKARGLLKSRGLKGT
CCCEEEEEEEEECCCCCEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
VKHKWKKKEKEREQKKRHEATKYYRLQNYDKLPGK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479