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The map label for this gene is 15920612

Identifier: 15920612

GI number: 15920612

Start: 419689

End: 420108

Strand: Reverse

Name: 15920612

Synonym: ST0406

Alternate gene names: NA

Gene position: 420108-419689 (Counterclockwise)

Preceding gene: 15920613

Following gene: 15920611

Centisome position: 15.59

GC content: 29.76

Gene sequence:

>420_bases
ATGCAAAAATTTGAGTTCTTTGAACACACTGCTGATATAGGTATACGAGCTTACGGAAGAAATTTAAATGAGGCATTTGA
AAATGCAGCGGTAGCTGTTTTTGAAGTTATGACTGACACAAGTAAAGTTGAACCCAAAGAAATGAGAGAAGTTAAAATAG
ATGGATATGATTTGGAGAATTTATTATATAGATGGATTGAGAGCTTATTAGTGTACTACGATTCTGAAATTATGTTATTT
AGTAAGTTTTATGTGAATATCGATGAAAAAAACTTAACTCTTGAAGGAAAAGCTTGGGGTGAAAAATTCGACCCAAACAA
ACATGAAAGAAGAACTGTAGTTAAAGCTATGACTTATCATGAGATGAAAATAGAAAATAAAGGAAATTATTACATTTTAA
CTTTTGTTGTTGATATTTAA

Upstream 100 bases:

>100_bases
GCTTCTTTTTTTACTTCTTTTGTCATAAATAGAGTTGTTCTTTGTCTTCCACCCATTACACATCAATTAAAAATAAATTC
CTACTAGCCTTTATATTTTT

Downstream 100 bases:

>100_bases
TTTTGCTCTACATTCTTCGCAGAAAGATGCTGATTTATTATCTACTTCTGCAATGGAATTACTAAACCTCATTACACATG
TAGGATTCGAACAATGGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MQKFEFFEHTADIGIRAYGRNLNEAFENAAVAVFEVMTDTSKVEPKEMREVKIDGYDLENLLYRWIESLLVYYDSEIMLF
SKFYVNIDEKNLTLEGKAWGEKFDPNKHERRTVVKAMTYHEMKIENKGNYYILTFVVDI

Sequences:

>Translated_139_residues
MQKFEFFEHTADIGIRAYGRNLNEAFENAAVAVFEVMTDTSKVEPKEMREVKIDGYDLENLLYRWIESLLVYYDSEIMLF
SKFYVNIDEKNLTLEGKAWGEKFDPNKHERRTVVKAMTYHEMKIENKGNYYILTFVVDI
>Mature_139_residues
MQKFEFFEHTADIGIRAYGRNLNEAFENAAVAVFEVMTDTSKVEPKEMREVKIDGYDLENLLYRWIESLLVYYDSEIMLF
SKFYVNIDEKNLTLEGKAWGEKFDPNKHERRTVVKAMTYHEMKIENKGNYYILTFVVDI

Specific function: Unknown

COG id: COG1371

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0211 (archease) family

Homologues:

Organism=Homo sapiens, GI30425510, Length=140, Percent_Identity=37.1428571428571, Blast_Score=102, Evalue=1e-22,
Organism=Homo sapiens, GI113414298, Length=75, Percent_Identity=41.3333333333333, Blast_Score=68, Evalue=2e-12,
Organism=Homo sapiens, GI169164528, Length=75, Percent_Identity=41.3333333333333, Blast_Score=68, Evalue=2e-12,
Organism=Homo sapiens, GI113413492, Length=75, Percent_Identity=41.3333333333333, Blast_Score=68, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17506009, Length=142, Percent_Identity=34.5070422535211, Blast_Score=85, Evalue=9e-18,
Organism=Drosophila melanogaster, GI24648776, Length=124, Percent_Identity=37.0967741935484, Blast_Score=89, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y406_SULTO (Q975L0)

Other databases:

- EMBL:   BA000023
- RefSeq:   NP_376281.1
- ProteinModelPortal:   Q975L0
- SMR:   Q975L0
- GeneID:   1458337
- GenomeReviews:   BA000023_GR
- KEGG:   sto:ST0406
- NMPDR:   fig|273063.1.peg.449
- HOGENOM:   HBG729173
- OMA:   YMTDTET
- ProtClustDB:   PRK00407
- BioCyc:   STOK273063:ST0406-MONOMER
- HAMAP:   MF_01222
- InterPro:   IPR002804
- InterPro:   IPR022952
- Gene3D:   G3DSA:3.55.10.10
- PANTHER:   PTHR12682

Pfam domain/function: PF01951 DUF101; SSF69819 DUF101

EC number: NA

Molecular weight: Translated: 16530; Mature: 16530

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKFEFFEHTADIGIRAYGRNLNEAFENAAVAVFEVMTDTSKVEPKEMREVKIDGYDLEN
CCCCHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEECCCCHHH
LLYRWIESLLVYYDSEIMLFSKFYVNIDEKNLTLEGKAWGEKFDPNKHERRTVVKAMTYH
HHHHHHHHHHHHHCCCEEEEEEEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHH
EMKIENKGNYYILTFVVDI
EEEEECCCCEEEEEEEEEC
>Mature Secondary Structure
MQKFEFFEHTADIGIRAYGRNLNEAFENAAVAVFEVMTDTSKVEPKEMREVKIDGYDLEN
CCCCHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEECCCCHHH
LLYRWIESLLVYYDSEIMLFSKFYVNIDEKNLTLEGKAWGEKFDPNKHERRTVVKAMTYH
HHHHHHHHHHHHHCCCEEEEEEEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHH
EMKIENKGNYYILTFVVDI
EEEEECCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479