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The map label for this gene is ribC [H]

Identifier: 15920596

GI number: 15920596

Start: 405997

End: 406461

Strand: Direct

Name: ribC [H]

Synonym: ST0393

Alternate gene names: 15920596

Gene position: 405997-406461 (Clockwise)

Preceding gene: 15920595

Following gene: 15920597

Centisome position: 15.07

GC content: 35.05

Gene sequence:

>465_bases
ATGAGAAAATACGGAGTAGTAGATACAACATTCTCGAGAATAGATATGGGAAGTATAGCAATAAAAGTTATAAGAGCAGA
AGATCCTGATGCAGAAATAATTAGATATACTGTTCCTGGGATAAAAGATATGCCAGTTGCTGCAAAGAGACTATTGGATG
AAGGCTGTGATGGTGTAATAACTCTTGGTTGGGTGGGGAAATCAATGTTAGATAAATACAGTTATCTTGCAACAAGCATA
GGTTTAATAATCACACAAGTACTAACTTCTAAGCATATAATTGATGTTACAGTTCATGAAGATGAAGTAAATGATGAAGA
AAAACTAAAAGATTTAGCAATAGATAGGGTAACTAAGCATGCAAAAAATCTAGTTATGCTAGTGAGAGATGGAAGAAATG
CACTAACTCCTTATGCGGGGAAAGGATTAAGACAGGGGTATGAAAATGCCGGACCAATCGATTAA

Upstream 100 bases:

>100_bases
ACGATGGATCAAGTCTTAGTAAAGAGAAAGCATTAAGATACGCAAGGTATAATGGATTTTTATTTATAGAGGGAAAAGAA
ATCTTAAAGGAGGTTCTAAT

Downstream 100 bases:

>100_bases
CTTAGCTATAGTAGTTGCTGAATTTAATTACGATATAACGTATCTGATGTTACAAAGAGCAATAGCTCATGCTAAGTTCC
TTGGTGCAAATGTAAAGGTT

Product: riboflavin synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MRKYGVVDTTFSRIDMGSIAIKVIRAEDPDAEIIRYTVPGIKDMPVAAKRLLDEGCDGVITLGWVGKSMLDKYSYLATSI
GLIITQVLTSKHIIDVTVHEDEVNDEEKLKDLAIDRVTKHAKNLVMLVRDGRNALTPYAGKGLRQGYENAGPID

Sequences:

>Translated_154_residues
MRKYGVVDTTFSRIDMGSIAIKVIRAEDPDAEIIRYTVPGIKDMPVAAKRLLDEGCDGVITLGWVGKSMLDKYSYLATSI
GLIITQVLTSKHIIDVTVHEDEVNDEEKLKDLAIDRVTKHAKNLVMLVRDGRNALTPYAGKGLRQGYENAGPID
>Mature_154_residues
MRKYGVVDTTFSRIDMGSIAIKVIRAEDPDAEIIRYTVPGIKDMPVAAKRLLDEGCDGVITLGWVGKSMLDKYSYLATSI
GLIITQVLTSKHIIDVTVHEDEVNDEEKLKDLAIDRVTKHAKNLVMLVRDGRNALTPYAGKGLRQGYENAGPID

Specific function: Unknown

COG id: COG1731

COG function: function code H; Archaeal riboflavin synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DMRL synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002180
- InterPro:   IPR006399 [H]

Pfam domain/function: PF00885 DMRL_synthase [H]

EC number: =2.5.1.9 [H]

Molecular weight: Translated: 17016; Mature: 17016

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKYGVVDTTFSRIDMGSIAIKVIRAEDPDAEIIRYTVPGIKDMPVAAKRLLDEGCDGVI
CCCCCCCCCHHHHCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCEE
TLGWVGKSMLDKYSYLATSIGLIITQVLTSKHIIDVTVHEDEVNDEEKLKDLAIDRVTKH
EHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH
AKNLVMLVRDGRNALTPYAGKGLRQGYENAGPID
HHHEEEEEECCCCCCCCCCCCHHHHCCCCCCCCC
>Mature Secondary Structure
MRKYGVVDTTFSRIDMGSIAIKVIRAEDPDAEIIRYTVPGIKDMPVAAKRLLDEGCDGVI
CCCCCCCCCHHHHCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCEE
TLGWVGKSMLDKYSYLATSIGLIITQVLTSKHIIDVTVHEDEVNDEEKLKDLAIDRVTKH
EHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH
AKNLVMLVRDGRNALTPYAGKGLRQGYENAGPID
HHHEEEEEECCCCCCCCCCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]