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The map label for this gene is ribB [H]

Identifier: 15920595

GI number: 15920595

Start: 405344

End: 406000

Strand: Direct

Name: ribB [H]

Synonym: ST0392

Alternate gene names: 15920595

Gene position: 405344-406000 (Clockwise)

Preceding gene: 15920594

Following gene: 15920596

Centisome position: 15.04

GC content: 32.12

Gene sequence:

>657_bases
ATGATTCAAAAGTCTGAGATTAGGAAAAACCTTGAGAGTGGATTGCCTATACTAATCTATGATTTTGATGGTAGAGAAGA
AGAAGTTGATATGATGTTTTATGCTGGGAAGATATCATGGAAAAGCATTAACTTATTAAGGAAAGATGCAGGAGGGTTAA
TATGTTATGTAACATCTAAAGAATATGGACAAAAGTTAGGATTAGACTTTATGGCTAATATAGTGAGGGAAAAATATCCT
TATTTAGCTAAAAAACCCTCATACGGTGACGAACCAGCCTTTTCTATTTGGTTAAACCATATAGATACAAAGACGGGAAT
AAATGATATTGATAGAGCAAAAACTATATCCGAACTTCATAACATTATCTCTTTACTTAATGAGGATGAAAAAATAGCTA
AGGAAAAATTTGAAACCGAATTCTACTCACCGGGTCATGTGCCTGTATTGTTATCTAGGGGAATAAGATATAGGAGAGGA
CATACTGAATTAAGTATATCTTTACTTGAGTATGTAAATTTAGAAAAAAGTGCTGTTATAGCTGAAATGTTGGACGATGG
ATCAAGTCTTAGTAAAGAGAAAGCATTAAGATACGCAAGGTATAATGGATTTTTATTTATAGAGGGAAAAGAAATCTTAA
AGGAGGTTCTAATATGA

Upstream 100 bases:

>100_bases
TACTAATATTACTAATTTCAGTAATCGTATTTATTACATTGAAAAGATATAAAGGCCATTAGTACATACGCTTTTATATT
TTTGATTAAAATTCTATCTG

Downstream 100 bases:

>100_bases
GAAAATACGGAGTAGTAGATACAACATTCTCGAGAATAGATATGGGAAGTATAGCAATAAAAGTTATAAGAGCAGAAGAT
CCTGATGCAGAAATAATTAG

Product: 3,4-dihydroxy-2-butanone 4-phosphate synthase

Products: NA

Alternate protein names: DHBP synthase [H]

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MIQKSEIRKNLESGLPILIYDFDGREEEVDMMFYAGKISWKSINLLRKDAGGLICYVTSKEYGQKLGLDFMANIVREKYP
YLAKKPSYGDEPAFSIWLNHIDTKTGINDIDRAKTISELHNIISLLNEDEKIAKEKFETEFYSPGHVPVLLSRGIRYRRG
HTELSISLLEYVNLEKSAVIAEMLDDGSSLSKEKALRYARYNGFLFIEGKEILKEVLI

Sequences:

>Translated_218_residues
MIQKSEIRKNLESGLPILIYDFDGREEEVDMMFYAGKISWKSINLLRKDAGGLICYVTSKEYGQKLGLDFMANIVREKYP
YLAKKPSYGDEPAFSIWLNHIDTKTGINDIDRAKTISELHNIISLLNEDEKIAKEKFETEFYSPGHVPVLLSRGIRYRRG
HTELSISLLEYVNLEKSAVIAEMLDDGSSLSKEKALRYARYNGFLFIEGKEILKEVLI
>Mature_218_residues
MIQKSEIRKNLESGLPILIYDFDGREEEVDMMFYAGKISWKSINLLRKDAGGLICYVTSKEYGQKLGLDFMANIVREKYP
YLAKKPSYGDEPAFSIWLNHIDTKTGINDIDRAKTISELHNIISLLNEDEKIAKEKFETEFYSPGHVPVLLSRGIRYRRG
HTELSISLLEYVNLEKSAVIAEMLDDGSSLSKEKALRYARYNGFLFIEGKEILKEVLI

Specific function: Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate [H]

COG id: COG0108

COG function: function code H; 3,4-dihydroxy-2-butanone 4-phosphate synthase

Gene ontology:

Cell location: Membrane-Associated [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHBP synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017945
- InterPro:   IPR000422 [H]

Pfam domain/function: PF00926 DHBP_synthase [H]

EC number: =4.1.99.12 [H]

Molecular weight: Translated: 25039; Mature: 25039

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQKSEIRKNLESGLPILIYDFDGREEEVDMMFYAGKISWKSINLLRKDAGGLICYVTSK
CCCHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEECH
EYGQKLGLDFMANIVREKYPYLAKKPSYGDEPAFSIWLNHIDTKTGINDIDRAKTISELH
HHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH
NIISLLNEDEKIAKEKFETEFYSPGHVPVLLSRGIRYRRGHTELSISLLEYVNLEKSAVI
HHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHH
AEMLDDGSSLSKEKALRYARYNGFLFIEGKEILKEVLI
HHHHCCCCCCCHHHHHHHHHHCCEEEEECHHHHHHHCC
>Mature Secondary Structure
MIQKSEIRKNLESGLPILIYDFDGREEEVDMMFYAGKISWKSINLLRKDAGGLICYVTSK
CCCHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEECH
EYGQKLGLDFMANIVREKYPYLAKKPSYGDEPAFSIWLNHIDTKTGINDIDRAKTISELH
HHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH
NIISLLNEDEKIAKEKFETEFYSPGHVPVLLSRGIRYRRGHTELSISLLEYVNLEKSAVI
HHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHH
AEMLDDGSSLSKEKALRYARYNGFLFIEGKEILKEVLI
HHHHCCCCCCCHHHHHHHHHHCCEEEEECHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]