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The map label for this gene is rps25e

Identifier: 15920574

GI number: 15920574

Start: 386971

End: 387300

Strand: Direct

Name: rps25e

Synonym: ST0372

Alternate gene names: 15920574

Gene position: 386971-387300 (Clockwise)

Preceding gene: 15920569

Following gene: 15920577

Centisome position: 14.36

GC content: 33.94

Gene sequence:

>330_bases
ATGGGTGGTGCTAGTAAGAAACCTATATCTACTGTAGAAAAAAGAATGAAAAAGATGGCTGAAGAGCAGCAAAAGAAGCA
ACAAAAAAGAGCAACAACAAAGACAGGGAAAGAGTTAACTAGTAAGAACGTTGTGATTGATAATGAAACATTAAAGAAAG
TGCAAGAAGAACTTAAAAAAGAGACCATAGTGACACCTTATACGTTATCAACTAAGTTAAATGTCACTATAAGTGTAGCA
AAGAAAATTTTAGAAGAGCTTGAAAGGCAAGGCGTAGTAAAAATAGGGACTAAAGACAGAAGAACAGCTGTTTATATAGC
TGCTTCATAA

Upstream 100 bases:

>100_bases
GCTCTTGCTATATTTCCAATTTTACTAACTATATCATCTATGTTCTGAGACATGTTAACATTTTTATTTTCCTTATACAT
ATTAATAAACGGTGTGCTAA

Downstream 100 bases:

>100_bases
AAATATTATTCTTCGTCTTCTTTTTGCTCTTCTAATTTTCTTCCTACATTAGTTTTAATCTTTTTTATACTTTTACAGAA
CCCTTGTAATACAGAATCTA

Product: 30S ribosomal protein S25e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MGGASKKPISTVEKRMKKMAEEQQKKQQKRATTKTGKELTSKNVVIDNETLKKVQEELKKETIVTPYTLSTKLNVTISVA
KKILEELERQGVVKIGTKDRRTAVYIAAS

Sequences:

>Translated_109_residues
MGGASKKPISTVEKRMKKMAEEQQKKQQKRATTKTGKELTSKNVVIDNETLKKVQEELKKETIVTPYTLSTKLNVTISVA
KKILEELERQGVVKIGTKDRRTAVYIAAS
>Mature_108_residues
GGASKKPISTVEKRMKKMAEEQQKKQQKRATTKTGKELTSKNVVIDNETLKKVQEELKKETIVTPYTLSTKLNVTISVAK
KILEELERQGVVKIGTKDRRTAVYIAAS

Specific function: Unknown

COG id: COG4901

COG function: function code J; Ribosomal protein S25

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S25e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS25_SULTO (Q975P8)

Other databases:

- EMBL:   BA000023
- RefSeq:   NP_376243.1
- GeneID:   1458296
- GenomeReviews:   BA000023_GR
- KEGG:   sto:ST0372
- NMPDR:   fig|273063.1.peg.411
- HOGENOM:   HBG553558
- OMA:   KYGIKMS
- ProtClustDB:   PRK09334
- BioCyc:   STOK273063:ST0372-MONOMER
- GO:   GO:0005840
- InterPro:   IPR004977
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- PANTHER:   PTHR12850
- ProDom:   PD012268

Pfam domain/function: PF03297 Ribosomal_S25

EC number: NA

Molecular weight: Translated: 12234; Mature: 12102

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGASKKPISTVEKRMKKMAEEQQKKQQKRATTKTGKELTSKNVVIDNETLKKVQEELKK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHH
ETIVTPYTLSTKLNVTISVAKKILEELERQGVVKIGTKDRRTAVYIAAS
HHCCCCEEECCEEHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEEEC
>Mature Secondary Structure 
GGASKKPISTVEKRMKKMAEEQQKKQQKRATTKTGKELTSKNVVIDNETLKKVQEELKK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHH
ETIVTPYTLSTKLNVTISVAKKILEELERQGVVKIGTKDRRTAVYIAAS
HHCCCCEEECCEEHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479