Click here to switch to the map view.

The map label for this gene is 15920535

Identifier: 15920535

GI number: 15920535

Start: 354621

End: 355082

Strand: Direct

Name: 15920535

Synonym: ST0336

Alternate gene names: NA

Gene position: 354621-355082 (Clockwise)

Preceding gene: 15920534

Following gene: 15920539

Centisome position: 13.16

GC content: 28.35

Gene sequence:

>462_bases
ATGGAATTGTTTATAGTGCTACATAACATAAGTAGTACTCAAAGAATTATTGATTTTGCAAAATTAATTTTTAATTTAAA
TATAAATCACTTTATAGTAACAAAAGTAGGTGGAGTAGCAGCACAAGCTGGTGTACCAGAAGTAAGCAAGTTAGCTTATA
AAAATAATAAATCATTTATAATATTACCAGATCTGAAAGACGCAATAGAAATTTTCAAGCCAGAAGTAGTTTATCTTTTT
ACACAGTCAGCAGAAAAAACATTTACAAAAGATTTACTTAAAGATAAAAATAGAGTAATGCTTGTCTTTCCGGGAAATGA
AAGCGGATTCAATAAATTAGAATTAAATTTAGGCGAACCAGTTAAAATAGAAGGGTTAAGTAGCGAAATATCACCGGTTG
CTCTTGTAGGCATAGTGACATATTGTTTAATTAATGAAGGGAAAATTTTGAATAAACAATAA

Upstream 100 bases:

>100_bases
ATTTTTCTAGGTAGCAGAGATGAGCAATATAATCAAGTAGGAGAAGCAGTTCCAGTAGTCTTATCTACCGCTATTGCACG
AGAAATAATGGGAAAAGTAT

Downstream 100 bases:

>100_bases
TTGAAGAAACTTTTATAAGTCAAAATATATAATAAGTTGTACAAGGGCCCGTCGTCTAGCCTGGTTAGGACGCCGCCCTT
ACAAGGCGGAGGTCCTGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MELFIVLHNISSTQRIIDFAKLIFNLNINHFIVTKVGGVAAQAGVPEVSKLAYKNNKSFIILPDLKDAIEIFKPEVVYLF
TQSAEKTFTKDLLKDKNRVMLVFPGNESGFNKLELNLGEPVKIEGLSSEISPVALVGIVTYCLINEGKILNKQ

Sequences:

>Translated_153_residues
MELFIVLHNISSTQRIIDFAKLIFNLNINHFIVTKVGGVAAQAGVPEVSKLAYKNNKSFIILPDLKDAIEIFKPEVVYLF
TQSAEKTFTKDLLKDKNRVMLVFPGNESGFNKLELNLGEPVKIEGLSSEISPVALVGIVTYCLINEGKILNKQ
>Mature_153_residues
MELFIVLHNISSTQRIIDFAKLIFNLNINHFIVTKVGGVAAQAGVPEVSKLAYKNNKSFIILPDLKDAIEIFKPEVVYLF
TQSAEKTFTKDLLKDKNRVMLVFPGNESGFNKLELNLGEPVKIEGLSSEISPVALVGIVTYCLINEGKILNKQ

Specific function: Unknown

COG id: COG4080

COG function: function code L; RecB-family nuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1199 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018665 [H]

Pfam domain/function: PF09895 DUF2122 [H]

EC number: NA

Molecular weight: Translated: 17022; Mature: 17022

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELFIVLHNISSTQRIIDFAKLIFNLNINHFIVTKVGGVAAQAGVPEVSKLAYKNNKSFI
CEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCEECCCCCCHHHHHHCCCCCCEE
ILPDLKDAIEIFKPEVVYLFTQSAEKTFTKDLLKDKNRVMLVFPGNESGFNKLELNLGEP
EECCCHHHHHHHCCEEEEEEECCCHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCC
VKIEGLSSEISPVALVGIVTYCLINEGKILNKQ
EEEECCCCCCCHHHHHHHHHHHHCCCCEEECCC
>Mature Secondary Structure
MELFIVLHNISSTQRIIDFAKLIFNLNINHFIVTKVGGVAAQAGVPEVSKLAYKNNKSFI
CEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCEECCCCCCHHHHHHCCCCCCEE
ILPDLKDAIEIFKPEVVYLFTQSAEKTFTKDLLKDKNRVMLVFPGNESGFNKLELNLGEP
EECCCHHHHHHHCCEEEEEEECCCHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCC
VKIEGLSSEISPVALVGIVTYCLINEGKILNKQ
EEEECCCCCCCHHHHHHHHHHHHCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]