| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is 15920508
Identifier: 15920508
GI number: 15920508
Start: 328662
End: 329960
Strand: Direct
Name: 15920508
Synonym: ST0313
Alternate gene names: NA
Gene position: 328662-329960 (Clockwise)
Preceding gene: 15920507
Following gene: 15920512
Centisome position: 12.2
GC content: 35.87
Gene sequence:
>1299_bases ATGGTCAGTTTCGATATTTCAAAGTTAAACTATGATCAAAGACTCCGCGTGCTTAAGAAGGCAGTAGAAAAGCATGGTAA GGCATATATTGCGAGAGTATGCAATGTTAACTTAGCTACTATTTATCGTTATTTAAATGGTCAGATTTCAACAATACCAG ATGAGGTAATTGAGAAGGCACTTCAAACATTAACAGTTGAAGAGATTAGTGATGCGATCTATGGTCTAAGGACTGTAGAA GTTGATCCAACGACTGCTTTAAGTGTAGTAGTTAAGGCAATGAAGGATGAGGGTTTTCGAAACTTCTTCCTATCCTTACT TTATAAATACTTAGGAGATTATTTAAAGCAAACATCTCAGTCCTATATCGTTACAGAAGAAGATGTTGAACTGTTTGAGA AGATTGTTAGAGAGACCAGAACTAAGAAGACAGCAGATGATATAATCAGGTATTTAACACGTGCTTTAGCAGAATTAAAT AATGAACTGACCCCTGATAGGTTAAAGGAGTATATATTTGAATTAACGGAAGAAAATAGGGGTAGAGCTAGACACACTGC AAAAGCATTAAAACTCTTCATTAAAGAAGTAGTAAAGACAAGGGATAGCCACTTAGCACGAGAGTTATATGATTCATTTA AAATACCTAAAGCTAAGACTAATTATAAGCCCGTCAGCCTGAGCTTAGATACATTAAAACAAATATTTAACAATATAGAG GATTTGGGTGCTAAAGCATTCTTCTTGATTTTGACTGAAACTGGGCTGAGAGTAGGCGAAGTATTAAACTTAAGAGTAGA CCAAATTGACTTAGAGCACAGAGTTATTAGGATTATGAAGGAGAGTGAGACTAAAAGAGCTTACATATCATTTCTTCATG AGGGTACTGCTAAATGGTTAAAAGAAGTTTATTTACCTTACCGCGAAGATTTCGTTAAACGTTATGAGCTCAACGTCAGA AAATTAGCCGAGGCTAACCCTGACCAAAATATAGATATTGAGGCGTGGAAGACAAAACTATTCCCATTCAGAGAGGATAT GCTTAGAGCTGAGATTAAAATTGCAATGAGGAAAGTGGGCAAAGAGTTCAGGCTTTATGATTTAAGATCATTCTTCGCAT CTTACATGATTAAACAAGGTGTTTCCCCAATGATAGTGAATTTATTGCAGGGTAGAGCACCACCACAGCAATTTCAGATA CTACAAAACCATTATTTAGCAATCTCAGATATTGAACTACAGCAGTACTATGATAAATATGCTCCACGCCTCTTAGAGAC TGTTCCAACATATTCTTAG
Upstream 100 bases:
>100_bases AAATTGAAAGATATTTTAATTCTCTATATCAGTACATTAATGCAAGGTATCTCGGCAAAAATGCAAAATCCTTATTAGGC TGAATGCTAAACATATATTG
Downstream 100 bases:
>100_bases ATATCGAAATATGAAATTGATGTAAGCACGTGTACTGTTTACAGTCCACTTTTTAGTAGAATCATTTGTAGATTTGCAGA GTATATTGTGTTTTTCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MVSFDISKLNYDQRLRVLKKAVEKHGKAYIARVCNVNLATIYRYLNGQISTIPDEVIEKALQTLTVEEISDAIYGLRTVE VDPTTALSVVVKAMKDEGFRNFFLSLLYKYLGDYLKQTSQSYIVTEEDVELFEKIVRETRTKKTADDIIRYLTRALAELN NELTPDRLKEYIFELTEENRGRARHTAKALKLFIKEVVKTRDSHLARELYDSFKIPKAKTNYKPVSLSLDTLKQIFNNIE DLGAKAFFLILTETGLRVGEVLNLRVDQIDLEHRVIRIMKESETKRAYISFLHEGTAKWLKEVYLPYREDFVKRYELNVR KLAEANPDQNIDIEAWKTKLFPFREDMLRAEIKIAMRKVGKEFRLYDLRSFFASYMIKQGVSPMIVNLLQGRAPPQQFQI LQNHYLAISDIELQQYYDKYAPRLLETVPTYS
Sequences:
>Translated_432_residues MVSFDISKLNYDQRLRVLKKAVEKHGKAYIARVCNVNLATIYRYLNGQISTIPDEVIEKALQTLTVEEISDAIYGLRTVE VDPTTALSVVVKAMKDEGFRNFFLSLLYKYLGDYLKQTSQSYIVTEEDVELFEKIVRETRTKKTADDIIRYLTRALAELN NELTPDRLKEYIFELTEENRGRARHTAKALKLFIKEVVKTRDSHLARELYDSFKIPKAKTNYKPVSLSLDTLKQIFNNIE DLGAKAFFLILTETGLRVGEVLNLRVDQIDLEHRVIRIMKESETKRAYISFLHEGTAKWLKEVYLPYREDFVKRYELNVR KLAEANPDQNIDIEAWKTKLFPFREDMLRAEIKIAMRKVGKEFRLYDLRSFFASYMIKQGVSPMIVNLLQGRAPPQQFQI LQNHYLAISDIELQQYYDKYAPRLLETVPTYS >Mature_432_residues MVSFDISKLNYDQRLRVLKKAVEKHGKAYIARVCNVNLATIYRYLNGQISTIPDEVIEKALQTLTVEEISDAIYGLRTVE VDPTTALSVVVKAMKDEGFRNFFLSLLYKYLGDYLKQTSQSYIVTEEDVELFEKIVRETRTKKTADDIIRYLTRALAELN NELTPDRLKEYIFELTEENRGRARHTAKALKLFIKEVVKTRDSHLARELYDSFKIPKAKTNYKPVSLSLDTLKQIFNNIE DLGAKAFFLILTETGLRVGEVLNLRVDQIDLEHRVIRIMKESETKRAYISFLHEGTAKWLKEVYLPYREDFVKRYELNVR KLAEANPDQNIDIEAWKTKLFPFREDMLRAEIKIAMRKVGKEFRLYDLRSFFASYMIKQGVSPMIVNLLQGRAPPQQFQI LQNHYLAISDIELQQYYDKYAPRLLETVPTYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50564; Mature: 50564
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSFDISKLNYDQRLRVLKKAVEKHGKAYIARVCNVNLATIYRYLNGQISTIPDEVIEKA CCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHH LQTLTVEEISDAIYGLRTVEVDPTTALSVVVKAMKDEGFRNFFLSLLYKYLGDYLKQTSQ HHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC SYIVTEEDVELFEKIVRETRTKKTADDIIRYLTRALAELNNELTPDRLKEYIFELTEENR CEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC GRARHTAKALKLFIKEVVKTRDSHLARELYDSFKIPKAKTNYKPVSLSLDTLKQIFNNIE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHH DLGAKAFFLILTETGLRVGEVLNLRVDQIDLEHRVIRIMKESETKRAYISFLHEGTAKWL HHCCHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEVYLPYREDFVKRYELNVRKLAEANPDQNIDIEAWKTKLFPFREDMLRAEIKIAMRKVG HHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHC KEFRLYDLRSFFASYMIKQGVSPMIVNLLQGRAPPQQFQILQNHYLAISDIELQQYYDKY HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCEEEEHHHHHHHHHHH APRLLETVPTYS HHHHHHHCCCCC >Mature Secondary Structure MVSFDISKLNYDQRLRVLKKAVEKHGKAYIARVCNVNLATIYRYLNGQISTIPDEVIEKA CCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHH LQTLTVEEISDAIYGLRTVEVDPTTALSVVVKAMKDEGFRNFFLSLLYKYLGDYLKQTSQ HHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC SYIVTEEDVELFEKIVRETRTKKTADDIIRYLTRALAELNNELTPDRLKEYIFELTEENR CEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC GRARHTAKALKLFIKEVVKTRDSHLARELYDSFKIPKAKTNYKPVSLSLDTLKQIFNNIE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHH DLGAKAFFLILTETGLRVGEVLNLRVDQIDLEHRVIRIMKESETKRAYISFLHEGTAKWL HHCCHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEVYLPYREDFVKRYELNVRKLAEANPDQNIDIEAWKTKLFPFREDMLRAEIKIAMRKVG HHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHC KEFRLYDLRSFFASYMIKQGVSPMIVNLLQGRAPPQQFQILQNHYLAISDIELQQYYDKY HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCEEEEHHHHHHHHHHH APRLLETVPTYS HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA