| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15920422
Identifier: 15920422
GI number: 15920422
Start: 259989
End: 260438
Strand: Direct
Name: 15920422
Synonym: ST0239
Alternate gene names: NA
Gene position: 259989-260438 (Clockwise)
Preceding gene: 15920421
Following gene: 15920428
Centisome position: 9.65
GC content: 28.0
Gene sequence:
>450_bases ATGTCTCAGCCAGGACAGACTAAATCAAAAGAGCTTAAACTCACATCTAAACAAGTATTTACTCCAGATTCATTAAAAGA TGATAAAAGAAAAATTAAATTACTGTATCTAATAAAAACCTTAAATGGAGCCTCAGAAAAAGCACTAACTATTGGTTTAT ATGAGCTAAAACAGAAGGGATTAGACTTAGGATATCAATTTAATGTAATCGGAAACAATGTTTTTAGTCCAATGATAAAA GAAGATATCACAGCATTACTATATGTTGGATATATAGAAAACGATCCGCAAAGTAAAAAATTAAAATTAACTTCTAGTGG CCAAGAATTCCTAGATAAACAGCAGATTGAGGATGACTTTAAAAATAATTTAGCACAACTTTTAAGCGATATTAAAATGA AGATAAATGCAATAGATGAAGAAAATAGACTTAAAAATAAAAGAAGATAA
Upstream 100 bases:
>100_bases TTGGTGGAGCAATAACAAGAGCGAAGAATCCATTAGAGGAAGCTAAGCAAATCGTTAAAATAATTAAGGGGTAAAATGAG AATTATAAAGGAGTGATTAA
Downstream 100 bases:
>100_bases TACTTTATTTCACATTGTCATGAACGTTCCTCTTCTATTTTGAGTAGTTTGTTGCTCTTCATTCAGAGGTCTATTCCATA TTAATGGATCTAATTTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MSQPGQTKSKELKLTSKQVFTPDSLKDDKRKIKLLYLIKTLNGASEKALTIGLYELKQKGLDLGYQFNVIGNNVFSPMIK EDITALLYVGYIENDPQSKKLKLTSSGQEFLDKQQIEDDFKNNLAQLLSDIKMKINAIDEENRLKNKRR
Sequences:
>Translated_149_residues MSQPGQTKSKELKLTSKQVFTPDSLKDDKRKIKLLYLIKTLNGASEKALTIGLYELKQKGLDLGYQFNVIGNNVFSPMIK EDITALLYVGYIENDPQSKKLKLTSSGQEFLDKQQIEDDFKNNLAQLLSDIKMKINAIDEENRLKNKRR >Mature_148_residues SQPGQTKSKELKLTSKQVFTPDSLKDDKRKIKLLYLIKTLNGASEKALTIGLYELKQKGLDLGYQFNVIGNNVFSPMIKE DITALLYVGYIENDPQSKKLKLTSSGQEFLDKQQIEDDFKNNLAQLLSDIKMKINAIDEENRLKNKRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17055; Mature: 16924
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPGQTKSKELKLTSKQVFTPDSLKDDKRKIKLLYLIKTLNGASEKALTIGLYELKQKG CCCCCCCCCHHEEECCCCCCCCCCCCCHHHHHHHHHEEECCCCCCCCEEEHHHHHHHHCC LDLGYQFNVIGNNVFSPMIKEDITALLYVGYIENDPQSKKLKLTSSGQEFLDKQQIEDDF CCCCEEEEEECCCHHHHHHHHHHHHHHEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHH KNNLAQLLSDIKMKINAIDEENRLKNKRR HHHHHHHHHHHHHHHHCCCCHHHHHCCCC >Mature Secondary Structure SQPGQTKSKELKLTSKQVFTPDSLKDDKRKIKLLYLIKTLNGASEKALTIGLYELKQKG CCCCCCCCHHEEECCCCCCCCCCCCCHHHHHHHHHEEECCCCCCCCEEEHHHHHHHHCC LDLGYQFNVIGNNVFSPMIKEDITALLYVGYIENDPQSKKLKLTSSGQEFLDKQQIEDDF CCCCEEEEEECCCHHHHHHHHHHHHHHEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHH KNNLAQLLSDIKMKINAIDEENRLKNKRR HHHHHHHHHHHHHHHHCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA