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The map label for this gene is ef1B

Identifier: 15920391

GI number: 15920391

Start: 230922

End: 231197

Strand: Direct

Name: ef1B

Synonym: STS027

Alternate gene names: 15920391

Gene position: 230922-231197 (Clockwise)

Preceding gene: 15920390

Following gene: 15920392

Centisome position: 8.57

GC content: 34.06

Gene sequence:

>276_bases
ATGACAGACGTCCTTGTAGTAGTAAAAGTATTCCCAGAAAGTGATGAAGTGAATCTTGATAATTTATATGAAGAAATTGG
TAAGAAACTACCCGCAGGATATAAGTTAGTAAGAAAAGAAACAGAGCCAATAGCTTACGGTTTAAAAGCATTAATTGCAT
ATGTACAAATGCCTGAAAATGTTGAGGGAGGAACTGATACATTAGAAGAGATAATAAACAGCATTCAAGGAGTAAGTCAT
GCTGAGGTAGTTGGTATTACAAGACTAGGTTTTTAA

Upstream 100 bases:

>100_bases
CTGTGGAGAAATAATTATAAGAAGATGTTATTATTGCAGAAAACACATAGTGTCCTATACTTGTCCAAAATGTGGTTTTG
AAGGTCCATAAGGTGATTAT

Downstream 100 bases:

>100_bases
ATTAATTATACTTTAAGTTCTTATACCACATTATTTATATACATATTTTGGAGATAGAGTTGAGTACTGGCGCTGAAATT
CCTCCTTCTGGTAAGAAAGA

Product: elongation factor 1-beta

Products: NA

Alternate protein names: EF-1-beta; aEF-1beta

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MTDVLVVVKVFPESDEVNLDNLYEEIGKKLPAGYKLVRKETEPIAYGLKALIAYVQMPENVEGGTDTLEEIINSIQGVSH
AEVVGITRLGF

Sequences:

>Translated_91_residues
MTDVLVVVKVFPESDEVNLDNLYEEIGKKLPAGYKLVRKETEPIAYGLKALIAYVQMPENVEGGTDTLEEIINSIQGVSH
AEVVGITRLGF
>Mature_90_residues
TDVLVVVKVFPESDEVNLDNLYEEIGKKLPAGYKLVRKETEPIAYGLKALIAYVQMPENVEGGTDTLEEIINSIQGVSHA
EVVGITRLGF

Specific function: Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA

COG id: COG2092

COG function: function code J; Translation elongation factor EF-1beta

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-1-beta/EF-1-delta family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): EF1B_SULTO (Q976H8)

Other databases:

- EMBL:   BA000023
- RefSeq:   NP_376060.1
- ProteinModelPortal:   Q976H8
- SMR:   Q976H8
- GeneID:   1458099
- GenomeReviews:   BA000023_GR
- KEGG:   sto:STS027
- NMPDR:   fig|273063.1.peg.228
- HOGENOM:   HBG541037
- OMA:   VALKFYV
- ProtClustDB:   PRK00435
- BioCyc:   STOK273063:STS027-MONOMER
- HAMAP:   MF_00043
- InterPro:   IPR014717
- InterPro:   IPR004542
- InterPro:   IPR014038
- Gene3D:   G3DSA:3.30.70.60
- PIRSF:   PIRSF006521
- SMART:   SM00888
- TIGRFAMs:   TIGR00489

Pfam domain/function: PF00736 EF1_GNE; SSF54984 Transl_elong_EF1B_B/D_G_exch

EC number: NA

Molecular weight: Translated: 10007; Mature: 9875

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDVLVVVKVFPESDEVNLDNLYEEIGKKLPAGYKLVRKETEPIAYGLKALIAYVQMPEN
CCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCC
VEGGTDTLEEIINSIQGVSHAEVVGITRLGF
CCCCHHHHHHHHHHHCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
TDVLVVVKVFPESDEVNLDNLYEEIGKKLPAGYKLVRKETEPIAYGLKALIAYVQMPEN
CCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCC
VEGGTDTLEEIINSIQGVSHAEVVGITRLGF
CCCCHHHHHHHHHHHCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479