Click here to switch to the map view.

The map label for this gene is 15920390

Identifier: 15920390

GI number: 15920390

Start: 230709

End: 230912

Strand: Direct

Name: 15920390

Synonym: STS026

Alternate gene names: NA

Gene position: 230709-230912 (Clockwise)

Preceding gene: 15920386

Following gene: 15920391

Centisome position: 8.56

GC content: 34.8

Gene sequence:

>204_bases
ATGAGTCTAAATTTCAGATTAAGTTTAAGAGAAGAGATTGAACCACCAGTATGCTCCAGTTGCGGAAAACTAATACACCC
TAGAGAGAAAGGAGTTGAATTTTACTGCCCTAACTGTGGAGAAATAATTATAAGAAGATGTTATTATTGCAGAAAACACA
TAGTGTCCTATACTTGTCCAAAATGTGGTTTTGAAGGTCCATAA

Upstream 100 bases:

>100_bases
TACCTTTTCCCATATCTAAATCTGTCCTTACGACTATTACCATTTTAGTAGCCATCAAAAAGAGAGAATTTATAAACCAA
ATTAAAAACTATGTAATACA

Downstream 100 bases:

>100_bases
GGTGATTATATGACAGACGTCCTTGTAGTAGTAAAAGTATTCCCAGAAAGTGATGAAGTGAATCTTGATAATTTATATGA
AGAAATTGGTAAGAAACTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 67; Mature: 66

Protein sequence:

>67_residues
MSLNFRLSLREEIEPPVCSSCGKLIHPREKGVEFYCPNCGEIIIRRCYYCRKHIVSYTCPKCGFEGP

Sequences:

>Translated_67_residues
MSLNFRLSLREEIEPPVCSSCGKLIHPREKGVEFYCPNCGEIIIRRCYYCRKHIVSYTCPKCGFEGP
>Mature_66_residues
SLNFRLSLREEIEPPVCSSCGKLIHPREKGVEFYCPNCGEIIIRRCYYCRKHIVSYTCPKCGFEGP

Specific function: Unknown

COG id: COG2888

COG function: function code J; Predicted Zn-ribbon RNA-binding protein with a function in translation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7758; Mature: 7627

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

11.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
13.4 %Cys+Met (Translated Protein)
12.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
12.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNFRLSLREEIEPPVCSSCGKLIHPREKGVEFYCPNCGEIIIRRCYYCRKHIVSYTCP
CCCCCCCCCHHHCCCCHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCC
KCGFEGP
CCCCCCC
>Mature Secondary Structure 
SLNFRLSLREEIEPPVCSSCGKLIHPREKGVEFYCPNCGEIIIRRCYYCRKHIVSYTCP
CCCCCCCCHHHCCCCHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCC
KCGFEGP
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA