| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15920375
Identifier: 15920375
GI number: 15920375
Start: 218841
End: 219269
Strand: Direct
Name: 15920375
Synonym: ST0196
Alternate gene names: NA
Gene position: 218841-219269 (Clockwise)
Preceding gene: 15920365
Following gene: 15920378
Centisome position: 8.12
GC content: 26.81
Gene sequence:
>429_bases ATGAGTATAACAACAGACGAATTGAAGAAATTCTTAGAAGAAAAAATAGCTGATTTAAAGAAAGAACTGGAGTTTTACGA GTATTTACTTAGTTTAATTGAAGCAGAGGGTTATAAGGGTATAGTAAAGGGAAACAAGGGGAGCATGGATGTTCTTAAAA GTAGCAGAGGAGAAATATTAGCTGAAATATATTATATGCCCCCTATTATGAGGGTAATAATTAAAGGAAAGACTACTATA AATAAAATTTATGTTAATGTACTCACAAAGATACTAGAAAATGAAAAAAATAGAAATAAAATAGATTATGATATTGTATT AGAAAGGGATGAACTTAAAGAAATAATTATAAAAAATGTTAAGGATGAGATAATTTATAATAAGATTAAGGCAGCTTTAC AATCTATTTTAGAGAGAGTCTCTTATTAA
Upstream 100 bases:
>100_bases CACCAGTATAACCTGAACCTCCTATTACAGCAACTCTTATCATCTTTTGACCATAAAGCAATAGGATTATAAGTAATTTA AGCATATATAGTATTATATT
Downstream 100 bases:
>100_bases TGTATCTAATGAAATTATTACCGGTCTAGGATCTGTTATAAATCTAATTAAAGCCTCACCTCTTCCTAGGAATGATAATT CGTTTGAAATTTCCTTATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MSITTDELKKFLEEKIADLKKELEFYEYLLSLIEAEGYKGIVKGNKGSMDVLKSSRGEILAEIYYMPPIMRVIIKGKTTI NKIYVNVLTKILENEKNRNKIDYDIVLERDELKEIIIKNVKDEIIYNKIKAALQSILERVSY
Sequences:
>Translated_142_residues MSITTDELKKFLEEKIADLKKELEFYEYLLSLIEAEGYKGIVKGNKGSMDVLKSSRGEILAEIYYMPPIMRVIIKGKTTI NKIYVNVLTKILENEKNRNKIDYDIVLERDELKEIIIKNVKDEIIYNKIKAALQSILERVSY >Mature_141_residues SITTDELKKFLEEKIADLKKELEFYEYLLSLIEAEGYKGIVKGNKGSMDVLKSSRGEILAEIYYMPPIMRVIIKGKTTIN KIYVNVLTKILENEKNRNKIDYDIVLERDELKEIIIKNVKDEIIYNKIKAALQSILERVSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16566; Mature: 16435
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITTDELKKFLEEKIADLKKELEFYEYLLSLIEAEGYKGIVKGNKGSMDVLKSSRGEIL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHH AEIYYMPPIMRVIIKGKTTINKIYVNVLTKILENEKNRNKIDYDIVLERDELKEIIIKNV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHEEECHHHHHHHHHHHH KDEIIYNKIKAALQSILERVSY HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SITTDELKKFLEEKIADLKKELEFYEYLLSLIEAEGYKGIVKGNKGSMDVLKSSRGEIL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHH AEIYYMPPIMRVIIKGKTTINKIYVNVLTKILENEKNRNKIDYDIVLERDELKEIIIKNV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHEEECHHHHHHHHHHHH KDEIIYNKIKAALQSILERVSY HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA