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The map label for this gene is pqqE [H]

Identifier: 15920304

GI number: 15920304

Start: 147746

End: 148789

Strand: Direct

Name: pqqE [H]

Synonym: ST0127

Alternate gene names: 15920304

Gene position: 147746-148789 (Clockwise)

Preceding gene: 15920303

Following gene: 15920305

Centisome position: 5.48

GC content: 35.73

Gene sequence:

>1044_bases
ATGCCCTTTGAAGATGCTCCGCATCTAGTATTTTGGGAAGTAACAAAAGCTTGCCCATTAACTTGCAAACATTGTAGAGC
TAATGCCATAGATAAACCATTGCCAGGAGAACTAACAACTGAAGAAGGAAAGAAACTACTTGAAGAAATATCCCAATTCG
GCAAAGTAGTCGTAGTATTTACCGGTGGAGATCCACTTTCGAGAGACGACATTTTTGAGCTAATGGATTATGCGAAATCT
TTAGGCTTAATAGTTTCCATTGCACCTGCACCTTCATACAGACTTAATGAAGATACAATCAAAAATATAAAAAACTCAGC
ACTTTATATGTCAATAAGCCTAGACGGCTATAAACCAGAAACACATGATTGGCTTAGAGGTTTTGGCAACTACAGATACG
CTATTAATGGTATTAAGCTTGGACTTAAGTATGGTATTCAGGTACAAGTAAACACCCTAGTTTGGAAAAGGAGTTATGAA
GAATTACCTTACATCGCTAAGCTTCTTAAAGATTTGGGAGTAAAAGTCTGGGAAGTATTCTTTTTAATCCCAGTAGGCAG
AGGCACTCTAGAATTAGATATCCCAAGAGAAAAATACAAAGATGTTATAGATTTTCTTGTGGAAGTAAGTAGATATAACA
TCGTAGTTAGAACTGTTGAGGCTCCATTTTTTAGAAGAGCAAAGCTTGAATACAAAGAGGTAAAAAATGAGTTAATTAGA
AAACTTAAAGAACTATTGGGAGAGTCTAAATCACCAGTAGATAAAAGCATATTACCAACAAGGGATGGAGCTGGAGTAAT
ATTTATCTCATATAATGGGGATATTTATCCAAGCGGATTTCTACCATTAAAATTAGGTAATGTAAGGGAAGACAGATTAA
TAGATGTTTACAGAAATTCAGAATTACTGAAAATGATTAAAGCTGGAAAACTTAAAGGCAAATGCGGTATTTGTGCATTT
TCAAATATTTGTGGCGGAAGTAGAGCTAGAGCCTATGCAGTTTACGGTGATCCATTAGCTGAAGACCCAGCATGCCCTTA
TTAA

Upstream 100 bases:

>100_bases
CGGGGAAATGTGCTACTTGTGAGTATAAAACTTACTGTAAAGGAGGAGATAGGGCTAGAGCATATTATTGGTCTGGAAAC
ATTTATGGAGATGATCCGTT

Downstream 100 bases:

>100_bases
CTTAAAAGATGGTTAGCAATGATTTCTCTCAATTTTACTCTAGATTGTATATTATCTTCCCTACTCGCGTATTATGAAAA
GAAATCTCCTATAAGCCGAG

Product: coenzyme PQQ synthesis protein

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MPFEDAPHLVFWEVTKACPLTCKHCRANAIDKPLPGELTTEEGKKLLEEISQFGKVVVVFTGGDPLSRDDIFELMDYAKS
LGLIVSIAPAPSYRLNEDTIKNIKNSALYMSISLDGYKPETHDWLRGFGNYRYAINGIKLGLKYGIQVQVNTLVWKRSYE
ELPYIAKLLKDLGVKVWEVFFLIPVGRGTLELDIPREKYKDVIDFLVEVSRYNIVVRTVEAPFFRRAKLEYKEVKNELIR
KLKELLGESKSPVDKSILPTRDGAGVIFISYNGDIYPSGFLPLKLGNVREDRLIDVYRNSELLKMIKAGKLKGKCGICAF
SNICGGSRARAYAVYGDPLAEDPACPY

Sequences:

>Translated_347_residues
MPFEDAPHLVFWEVTKACPLTCKHCRANAIDKPLPGELTTEEGKKLLEEISQFGKVVVVFTGGDPLSRDDIFELMDYAKS
LGLIVSIAPAPSYRLNEDTIKNIKNSALYMSISLDGYKPETHDWLRGFGNYRYAINGIKLGLKYGIQVQVNTLVWKRSYE
ELPYIAKLLKDLGVKVWEVFFLIPVGRGTLELDIPREKYKDVIDFLVEVSRYNIVVRTVEAPFFRRAKLEYKEVKNELIR
KLKELLGESKSPVDKSILPTRDGAGVIFISYNGDIYPSGFLPLKLGNVREDRLIDVYRNSELLKMIKAGKLKGKCGICAF
SNICGGSRARAYAVYGDPLAEDPACPY
>Mature_346_residues
PFEDAPHLVFWEVTKACPLTCKHCRANAIDKPLPGELTTEEGKKLLEEISQFGKVVVVFTGGDPLSRDDIFELMDYAKSL
GLIVSIAPAPSYRLNEDTIKNIKNSALYMSISLDGYKPETHDWLRGFGNYRYAINGIKLGLKYGIQVQVNTLVWKRSYEE
LPYIAKLLKDLGVKVWEVFFLIPVGRGTLELDIPREKYKDVIDFLVEVSRYNIVVRTVEAPFFRRAKLEYKEVKNELIRK
LKELLGESKSPVDKSILPTRDGAGVIFISYNGDIYPSGFLPLKLGNVREDRLIDVYRNSELLKMIKAGKLKGKCGICAFS
NICGGSRARAYAVYGDPLAEDPACPY

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 39161; Mature: 39030

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFEDAPHLVFWEVTKACPLTCKHCRANAIDKPLPGELTTEEGKKLLEEISQFGKVVVVF
CCCCCCCCEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE
TGGDPLSRDDIFELMDYAKSLGLIVSIAPAPSYRLNEDTIKNIKNSALYMSISLDGYKPE
ECCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHCCCCEEEEEEEECCCCCC
THDWLRGFGNYRYAINGIKLGLKYGIQVQVNTLVWKRSYEELPYIAKLLKDLGVKVWEVF
HHHHHHHCCCCEEEEEEEEEEEEECEEEEEEEEEECCCHHCCHHHHHHHHHHCHHHEEEE
FLIPVGRGTLELDIPREKYKDVIDFLVEVSRYNIVVRTVEAPFFRRAKLEYKEVKNELIR
EEEECCCCEEEECCCHHHHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHHHHHH
KLKELLGESKSPVDKSILPTRDGAGVIFISYNGDIYPSGFLPLKLGNVREDRLIDVYRNS
HHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCEEEECCCH
ELLKMIKAGKLKGKCGICAFSNICGGSRARAYAVYGDPLAEDPACPY
HHHHHHHHCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
PFEDAPHLVFWEVTKACPLTCKHCRANAIDKPLPGELTTEEGKKLLEEISQFGKVVVVF
CCCCCCCEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE
TGGDPLSRDDIFELMDYAKSLGLIVSIAPAPSYRLNEDTIKNIKNSALYMSISLDGYKPE
ECCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHCCCCEEEEEEEECCCCCC
THDWLRGFGNYRYAINGIKLGLKYGIQVQVNTLVWKRSYEELPYIAKLLKDLGVKVWEVF
HHHHHHHCCCCEEEEEEEEEEEEECEEEEEEEEEECCCHHCCHHHHHHHHHHCHHHEEEE
FLIPVGRGTLELDIPREKYKDVIDFLVEVSRYNIVVRTVEAPFFRRAKLEYKEVKNELIR
EEEECCCCEEEECCCHHHHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHHHHHH
KLKELLGESKSPVDKSILPTRDGAGVIFISYNGDIYPSGFLPLKLGNVREDRLIDVYRNS
HHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCEEEECCCH
ELLKMIKAGKLKGKCGICAFSNICGGSRARAYAVYGDPLAEDPACPY
HHHHHHHHCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]