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The map label for this gene is ctaC [H]

Identifier: 15920284

GI number: 15920284

Start: 129637

End: 130080

Strand: Direct

Name: ctaC [H]

Synonym: ST0105

Alternate gene names: 15920284

Gene position: 129637-130080 (Clockwise)

Preceding gene: 15920283

Following gene: 15920285

Centisome position: 4.81

GC content: 35.14

Gene sequence:

>444_bases
ATGGCTAGGTTATCTATAGAAGTAATAACTATGATAGGGGCAGCTTTAATTCTTGCCGTATTAGGTGGTATTGCATTTCA
TGATCTAATAATGATAGATACTGGCGGATATTTTCCCCATAACGAAAAGCCAGAAGTGATTAGAGTTATAGCAAGACAAT
ACGTTTGGGAATTTATATATCCTAACGGTACTATAAGTTATGATAAGGTTGTTATACAAGCGGGTAAACCATATATCTTT
AATCTAACTTCCGCTGATGTAATCCACGCAATGTATATTGTACAATTAGGGTATAAGCTTGAAGCTATTCCAGGATATTA
TTATCCATTATACATAATAGTAGATAAACCGGGAGTGTATAACATTTACTGTGCAGAATTTTGCGGTCCGGGACACTATA
CTATGATAGGAGAGCTAATAGTAGTTAATTCTACAGCAGGGTGA

Upstream 100 bases:

>100_bases
CATCCCCTAACGTAACTACTCCATATGTTGTTATAAGCTAAATTCTTTTTTATAATTTTTTGCGTTAACTATAAATATTA
GATTATTAAATATTCTTTTG

Downstream 100 bases:

>100_bases
TAAGATGAGTCAAAGGCTCTCTAAGAAGGATTACGCATTATGGGTAATATCTGTAATAGTAATGTTCTTTATATTTGAGG
CATTAGGAAATTTCGGAAAT

Product: cytochrome c oxidase polypeptide II

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II; Oxidase aa(3) subunit 2 [H]

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MARLSIEVITMIGAALILAVLGGIAFHDLIMIDTGGYFPHNEKPEVIRVIARQYVWEFIYPNGTISYDKVVIQAGKPYIF
NLTSADVIHAMYIVQLGYKLEAIPGYYYPLYIIVDKPGVYNIYCAEFCGPGHYTMIGELIVVNSTAG

Sequences:

>Translated_147_residues
MARLSIEVITMIGAALILAVLGGIAFHDLIMIDTGGYFPHNEKPEVIRVIARQYVWEFIYPNGTISYDKVVIQAGKPYIF
NLTSADVIHAMYIVQLGYKLEAIPGYYYPLYIIVDKPGVYNIYCAEFCGPGHYTMIGELIVVNSTAG
>Mature_146_residues
ARLSIEVITMIGAALILAVLGGIAFHDLIMIDTGGYFPHNEKPEVIRVIARQYVWEFIYPNGTISYDKVVIQAGKPYIFN
LTSADVIHAMYIVQLGYKLEAIPGYYYPLYIIVDKPGVYNIYCAEFCGPGHYTMIGELIVVNSTAG

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=133, Percent_Identity=30.8270676691729, Blast_Score=69, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR014222
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF00116 COX2; PF02790 COX2_TM; PF00034 Cytochrom_C [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 16359; Mature: 16228

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: PS00078 COX2 ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLSIEVITMIGAALILAVLGGIAFHDLIMIDTGGYFPHNEKPEVIRVIARQYVWEFIY
CCEEHHHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCCCCCCCHHHHHHHHHHHHHEEEC
PNGTISYDKVVIQAGKPYIFNLTSADVIHAMYIVQLGYKLEAIPGYYYPLYIIVDKPGVY
CCCCEEHHEEEEECCCCEEEECCHHHHHHHHHHHHHCCEEEECCCEEEEEEEEEECCCCE
NIYCAEFCGPGHYTMIGELIVVNSTAG
EEEEECCCCCCCEEEEEEEEEEECCCC
>Mature Secondary Structure 
ARLSIEVITMIGAALILAVLGGIAFHDLIMIDTGGYFPHNEKPEVIRVIARQYVWEFIY
CEEHHHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCCCCCCCHHHHHHHHHHHHHEEEC
PNGTISYDKVVIQAGKPYIFNLTSADVIHAMYIVQLGYKLEAIPGYYYPLYIIVDKPGVY
CCCCEEHHEEEEECCCCEEEECCHHHHHHHHHHHHHCCEEEECCCEEEEEEEEEECCCCE
NIYCAEFCGPGHYTMIGELIVVNSTAG
EEEEECCCCCCCEEEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7678007 [H]