| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15920185
Identifier: 15920185
GI number: 15920185
Start: 19416
End: 20111
Strand: Direct
Name: 15920185
Synonym: ST0015
Alternate gene names: NA
Gene position: 19416-20111 (Clockwise)
Preceding gene: 15920184
Following gene: 15920186
Centisome position: 0.72
GC content: 38.07
Gene sequence:
>696_bases ATGAAGAAAGTATATCTGTTTAAACTCAAGTTTAATACTCCTTACGGGCTTAGGGTAGGTGGACCTAAGGAAGATATAAG CACTCTCACCCCGCTAAAAATAGGTCAACATTACGTAATACCATCAAGCAGCTGGAAGGGAATATTCAGAAGGACTACTG AGGTCTTAATTACTAATCCGAACCACTTTAGGGGTCATGAAGGTGAAGATGTTACAGACGATGGAAGCTTAGACGAATTG TTGGAAGCTAAGGGGTTAGAAAACAAAAATGATGAGAATGTGAGAAAGGAAAGGAAGAGATTTATTGCAATGTGGAACTG CCCGGTAGAAAGGCTTTATGGGAGCGAATATTTTGCATCCGCTGTAACATTTTCCGATACTTTAATTGACGCTGAGATAA ATCAGAGGACTCATGTAGTAATTGACAGGAAGACAAGGAAAAGTGAGGAAAAACACTTATATAGCGAGCAAATTGTAAAC GTTAATAGTGTTAGGGTCAAGGTTATAGTAAGGGATAGAATCGATGATTGGATTAAAACGCTAAAATTCCTCAGCGAATT TGGTACTTTTGTAGGCGGCGGAAAATCTAGAGGGATAGGCTATGCAGTATTAGATTGGAAAGAGAGTGAATATGCAGAAG TTGATGGACTAACTAGAAAAATCATGTTTAAACCATTAGACGAATTAAAGCTATAA
Upstream 100 bases:
>100_bases TTAAGGATAAGGGCAATTACGATGAACTGTTGCCCGCTGGTTTAAATTTCATATTCGGGATTGATGATTTAGATTCTCTA CTTCAGAAGGTGAATGTTAA
Downstream 100 bases:
>100_bases TTTTTTGATTAGATATAAACAAAGAAAAGAATACAGTAAAAATACATAATTTAATATTGATAAGATAGTATTACTTTTAA CTTCTTTTATGTTATGTATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MKKVYLFKLKFNTPYGLRVGGPKEDISTLTPLKIGQHYVIPSSSWKGIFRRTTEVLITNPNHFRGHEGEDVTDDGSLDEL LEAKGLENKNDENVRKERKRFIAMWNCPVERLYGSEYFASAVTFSDTLIDAEINQRTHVVIDRKTRKSEEKHLYSEQIVN VNSVRVKVIVRDRIDDWIKTLKFLSEFGTFVGGGKSRGIGYAVLDWKESEYAEVDGLTRKIMFKPLDELKL
Sequences:
>Translated_231_residues MKKVYLFKLKFNTPYGLRVGGPKEDISTLTPLKIGQHYVIPSSSWKGIFRRTTEVLITNPNHFRGHEGEDVTDDGSLDEL LEAKGLENKNDENVRKERKRFIAMWNCPVERLYGSEYFASAVTFSDTLIDAEINQRTHVVIDRKTRKSEEKHLYSEQIVN VNSVRVKVIVRDRIDDWIKTLKFLSEFGTFVGGGKSRGIGYAVLDWKESEYAEVDGLTRKIMFKPLDELKL >Mature_231_residues MKKVYLFKLKFNTPYGLRVGGPKEDISTLTPLKIGQHYVIPSSSWKGIFRRTTEVLITNPNHFRGHEGEDVTDDGSLDEL LEAKGLENKNDENVRKERKRFIAMWNCPVERLYGSEYFASAVTFSDTLIDAEINQRTHVVIDRKTRKSEEKHLYSEQIVN VNSVRVKVIVRDRIDDWIKTLKFLSEFGTFVGGGKSRGIGYAVLDWKESEYAEVDGLTRKIMFKPLDELKL
Specific function: Unknown
COG id: COG1337
COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26649; Mature: 26649
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVYLFKLKFNTPYGLRVGGPKEDISTLTPLKIGQHYVIPSSSWKGIFRRTTEVLITNP CCEEEEEEEEECCCCCEEECCCHHHHHHCCCCCCCCEEEECCCCCCHHHHCCEEEEEECC NHFRGHEGEDVTDDGSLDELLEAKGLENKNDENVRKERKRFIAMWNCPVERLYGSEYFAS CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHEEEEECCCHHHHCCCHHHHH AVTFSDTLIDAEINQRTHVVIDRKTRKSEEKHLYSEQIVNVNSVRVKVIVRDRIDDWIKT HHHHHHHEEECCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHH LKFLSEFGTFVGGGKSRGIGYAVLDWKESEYAEVDGLTRKIMFKPLDELKL HHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHHHCC >Mature Secondary Structure MKKVYLFKLKFNTPYGLRVGGPKEDISTLTPLKIGQHYVIPSSSWKGIFRRTTEVLITNP CCEEEEEEEEECCCCCEEECCCHHHHHHCCCCCCCCEEEECCCCCCHHHHCCEEEEEECC NHFRGHEGEDVTDDGSLDELLEAKGLENKNDENVRKERKRFIAMWNCPVERLYGSEYFAS CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHEEEEECCCHHHHCCCHHHHH AVTFSDTLIDAEINQRTHVVIDRKTRKSEEKHLYSEQIVNVNSVRVKVIVRDRIDDWIKT HHHHHHHEEECCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHH LKFLSEFGTFVGGGKSRGIGYAVLDWKESEYAEVDGLTRKIMFKPLDELKL HHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA