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The map label for this gene is glyQ [H]

Identifier: 15893240

GI number: 15893240

Start: 1221232

End: 1222098

Strand: Reverse

Name: glyQ [H]

Synonym: RC1317

Alternate gene names: 15893240

Gene position: 1222098-1221232 (Counterclockwise)

Preceding gene: 15893241

Following gene: 161723838

Centisome position: 96.32

GC content: 40.14

Gene sequence:

>867_bases
ATGAAAAAACTATCATTTCAGCAAATTATTCTGACATTACAAAATTATTGGCAGGATTATGGCTGTGCAATATTGCAACC
TTACGATGCCCATGTTGGAGCCGGTACGTTTCACCCTGCAACTGTACTTCGCTGCCTTGGTACTAAACCTTGGTCTGTTG
CATATGTTCAGCCATCAAGAAGACCAGGGGATAGCAGGTATGGCATGCATCCTAATAGAATGCAGCATTATTATCAGTTT
CAAGTTATCTTAAAGCCGTCTCCAGATAATATTCAAGAGTTATATCTTAAAAGCTTAGAATGTTTAGGCATAGATTTAAA
AATTCATGATATCAGATTTGTTGAAGATGATTGGGAGTCGCCAACCTTAGGTGCTGCCGGGCTTGGCTGGGAAGTATGGT
GTAACGGTATGGAAGTATCGCAATTTACTTATATGCAGCAAATCGGTGGTATTGAATGCCGTCCCGTTGCCGGTGAAATC
ACTTATGGACTCGAGAGGCTTGCTTTATATATTCAAGGTGTTGATGAAGTAAGAGAGCTTGATTGGAGCGGGCAAGTAGG
CGAAAAAGCTTTAAAATACGGTGAAGTGGATTTCGAAGCTGAAGGGCAATTTTCAAAATATAATTTAGAGCTTGCCGATA
GTGAAATGTTACTGCGACATTTCAAGGATAGCGAAGACCAGTGTGAGAGATTAATCAAAGCTAATTTACCTATGCCGGCT
TATGATGAATGCCTTAAGGCAAGTCATGCATTTAATCAACTAAATGCACTTGGAGTAATCAGCGTCACTGAGCGTGCTTC
GTATGTTTTAAGAGTGCGTCATTTAGCTAGAATTTGTTGTACAAAATGGTTGGAGATGAACAAGTGA

Upstream 100 bases:

>100_bases
ATACTAGTTACTAGAAATATTAAACATTATAATATGTTTAATATAAAAATATTTGATCCTTTTAACTGATCAAAATTTTC
TTTCCCAATAATAATACCCT

Downstream 100 bases:

>100_bases
GCGAGTTATTATTAGAACTATTTAGCGAAGAAATTCCGGCTTTTATGCAAAAAAATGCTGAAGAGGGTTATTTAAATATA
TTCACGAAAATTTTTGAAGA

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS [H]

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKKLSFQQIILTLQNYWQDYGCAILQPYDAHVGAGTFHPATVLRCLGTKPWSVAYVQPSRRPGDSRYGMHPNRMQHYYQF
QVILKPSPDNIQELYLKSLECLGIDLKIHDIRFVEDDWESPTLGAAGLGWEVWCNGMEVSQFTYMQQIGGIECRPVAGEI
TYGLERLALYIQGVDEVRELDWSGQVGEKALKYGEVDFEAEGQFSKYNLELADSEMLLRHFKDSEDQCERLIKANLPMPA
YDECLKASHAFNQLNALGVISVTERASYVLRVRHLARICCTKWLEMNK

Sequences:

>Translated_288_residues
MKKLSFQQIILTLQNYWQDYGCAILQPYDAHVGAGTFHPATVLRCLGTKPWSVAYVQPSRRPGDSRYGMHPNRMQHYYQF
QVILKPSPDNIQELYLKSLECLGIDLKIHDIRFVEDDWESPTLGAAGLGWEVWCNGMEVSQFTYMQQIGGIECRPVAGEI
TYGLERLALYIQGVDEVRELDWSGQVGEKALKYGEVDFEAEGQFSKYNLELADSEMLLRHFKDSEDQCERLIKANLPMPA
YDECLKASHAFNQLNALGVISVTERASYVLRVRHLARICCTKWLEMNK
>Mature_288_residues
MKKLSFQQIILTLQNYWQDYGCAILQPYDAHVGAGTFHPATVLRCLGTKPWSVAYVQPSRRPGDSRYGMHPNRMQHYYQF
QVILKPSPDNIQELYLKSLECLGIDLKIHDIRFVEDDWESPTLGAAGLGWEVWCNGMEVSQFTYMQQIGGIECRPVAGEI
TYGLERLALYIQGVDEVRELDWSGQVGEKALKYGEVDFEAEGQFSKYNLELADSEMLLRHFKDSEDQCERLIKANLPMPA
YDECLKASHAFNQLNALGVISVTERASYVLRVRHLARICCTKWLEMNK

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789983, Length=276, Percent_Identity=61.5942028985507, Blast_Score=348, Evalue=2e-97,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006194
- InterPro:   IPR002310 [H]

Pfam domain/function: PF02091 tRNA-synt_2e [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 33027; Mature: 33027

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLSFQQIILTLQNYWQDYGCAILQPYDAHVGAGTFHPATVLRCLGTKPWSVAYVQPSR
CCCCHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCC
RPGDSRYGMHPNRMQHYYQFQVILKPSPDNIQELYLKSLECLGIDLKIHDIRFVEDDWES
CCCCCCCCCCHHHHHEEEEEEEEEECCCCHHHHHHHHHHHHEEEEEEEEEEEEECCCCCC
PTLGAAGLGWEVWCNGMEVSQFTYMQQIGGIECRPVAGEITYGLERLALYIQGVDEVREL
CCCCCCCCCHHHEECCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCHHHHHHC
DWSGQVGEKALKYGEVDFEAEGQFSKYNLELADSEMLLRHFKDSEDQCERLIKANLPMPA
CCCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCHHHHHHHHCCCHHHHHHHHHCCCCCCH
YDECLKASHAFNQLNALGVISVTERASYVLRVRHLARICCTKWLEMNK
HHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKLSFQQIILTLQNYWQDYGCAILQPYDAHVGAGTFHPATVLRCLGTKPWSVAYVQPSR
CCCCHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCC
RPGDSRYGMHPNRMQHYYQFQVILKPSPDNIQELYLKSLECLGIDLKIHDIRFVEDDWES
CCCCCCCCCCHHHHHEEEEEEEEEECCCCHHHHHHHHHHHHEEEEEEEEEEEEECCCCCC
PTLGAAGLGWEVWCNGMEVSQFTYMQQIGGIECRPVAGEITYGLERLALYIQGVDEVREL
CCCCCCCCCHHHEECCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCHHHHHHC
DWSGQVGEKALKYGEVDFEAEGQFSKYNLELADSEMLLRHFKDSEDQCERLIKANLPMPA
CCCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCHHHHHHHHCCCHHHHHHHHHCCCCCCH
YDECLKASHAFNQLNALGVISVTERASYVLRVRHLARICCTKWLEMNK
HHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA