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The map label for this gene is ybcS [C]

Identifier: 15893221

GI number: 15893221

Start: 1202198

End: 1202401

Strand: Reverse

Name: ybcS [C]

Synonym: RC1298

Alternate gene names: 15893221

Gene position: 1202401-1202198 (Counterclockwise)

Preceding gene: 15893222

Following gene: 15893217

Centisome position: 94.77

GC content: 42.65

Gene sequence:

>204_bases
GTGCCATTAACCGAAAACCAACAAGCCGCCTTAATCTCGTTTATTTTCAACTGTGGGGCTGGGGCATTTCAAGCATCAAC
ATTGCAGCAAAAGCTAAACAGAGGTGAATATGCAAACGCTGCTAACGAGTTACTGCGATGGATGTGTGCTAAAGGCGGTC
TTAAGCTGCAAGGCTTAGTGAAACGTCAATATTATAGATTATAA

Upstream 100 bases:

>100_bases
CTCCCAAGAATATATCGCAAAAAAGCAAGCGAGGATCTGTAGAAAGATAAATAATAATTACTCGAAGCTGGTAAATGTAT
CGATAATCGTCCACTAGGGT

Downstream 100 bases:

>100_bases
TTATTACTAATTATTAAAACTTTTGATTATTTCCTGTAATTCTCTAATAATATGCTTAAACTAAGAGATATTACAGGAAA
CCTGCTATAAATATTTATCA

Product: putative lysozyme

Products: Hydrolysed Peptidoglycan; Chitodextrin [C]

Alternate protein names: Glycoside Hydrolase Family Protein; Lysozyme

Number of amino acids: Translated: 67; Mature: 66

Protein sequence:

>67_residues
MPLTENQQAALISFIFNCGAGAFQASTLQQKLNRGEYANAANELLRWMCAKGGLKLQGLVKRQYYRL

Sequences:

>Translated_67_residues
MPLTENQQAALISFIFNCGAGAFQASTLQQKLNRGEYANAANELLRWMCAKGGLKLQGLVKRQYYRL
>Mature_66_residues
PLTENQQAALISFIFNCGAGAFQASTLQQKLNRGEYANAANELLRWMCAKGGLKLQGLVKRQYYRL

Specific function: Essential For Lysis Of Bacterial Cell Wall, By Showing Cell Wall Hydrolyzing Activity (By Similarity). [C]

COG id: COG3772

COG function: function code R; Phage-related lysozyme (muraminidase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.2.1.17 [C]

Molecular weight: Translated: 7509; Mature: 7378

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLTENQQAALISFIFNCGAGAFQASTLQQKLNRGEYANAANELLRWMCAKGGLKLQGLV
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHH
KRQYYRL
HHHHHCC
>Mature Secondary Structure 
PLTENQQAALISFIFNCGAGAFQASTLQQKLNRGEYANAANELLRWMCAKGGLKLQGLV
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHH
KRQYYRL
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Peptidoglycan (N-acetylmuraminic acid and N-acetyl-D-glucosamine Residues); Chitodextrin (N-acetyl-D-glucosamine residues) [C]

Specific reaction: Hydrolysis of beta-linkage between N-acetylmuraminic acid and N-acetyl- D-glucosamine residues in peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrin [C]

General reaction: O-Glycosyl bond hydrolysis; glycosyltransfer to saccharides other alcohols and H2O [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA