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The map label for this gene is 15893180

Identifier: 15893180

GI number: 15893180

Start: 1161645

End: 1162172

Strand: Reverse

Name: 15893180

Synonym: RC1257

Alternate gene names: NA

Gene position: 1162172-1161645 (Counterclockwise)

Preceding gene: 15893181

Following gene: 15893179

Centisome position: 91.6

GC content: 35.42

Gene sequence:

>528_bases
ATGATGTTTACCTGTGATAATACTAGTGTAAATGTCGGGGGCAATATCTCAGGAAGTAATATAACTTTCGATCTTGGTAA
TAATAAAGTTACTTATACAGGCTCTGCTACTCCTACCGGTGAGCTTATTATAAATGTCTTCTATGATACTATAAATGCAG
GGCAAACAGGCAACGCTAATAGCCGTAATATAGTACTCGCAAGCGGTAGTACCTTTGATTTATCAAATGTTTCTTCAATT
AAAGTATTTTTAACTGCACAAAATAATCCGTTTGCTATTGGGCAAGGTAGTGCTTATCCTATCATCACCACGGCAGGAGG
TAATATCATAGTTGGTAATGCTGTAAGCTTACCGTTTAATGTAACCGCTAATGAAGGTGGTTTTGTCAGATGGCAAATTA
CAGGTAATTCCTTTGTACTTTTGACGATAGAACCAACAGGAGATGTAACAATAGATAATATCATCAAAATTTTAATAAAT
ACTCCTGTTGGTAATGTTATAGTAAATACCCTTGTAGGGCAAAGATGA

Upstream 100 bases:

>100_bases
GTAACAGGCACTAATACTATTACTTTTGCACCGAAGAAAACCGCTTTTATTATTGCATCGGATTTAGGAGCAAATACTAT
AAGTTGCCGATCAAGCAACA

Downstream 100 bases:

>100_bases
GAAGTCGTTGAACATCTATTACCTATAATTCAAAGACCTTCAAATGAAATACATAGAATAACTACTCCGCTTATTACCCC
AATGGGGTCCTTCCGTCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: Cell Surface Antigen-Like Protein Sca

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MMFTCDNTSVNVGGNISGSNITFDLGNNKVTYTGSATPTGELIINVFYDTINAGQTGNANSRNIVLASGSTFDLSNVSSI
KVFLTAQNNPFAIGQGSAYPIITTAGGNIIVGNAVSLPFNVTANEGGFVRWQITGNSFVLLTIEPTGDVTIDNIIKILIN
TPVGNVIVNTLVGQR

Sequences:

>Translated_175_residues
MMFTCDNTSVNVGGNISGSNITFDLGNNKVTYTGSATPTGELIINVFYDTINAGQTGNANSRNIVLASGSTFDLSNVSSI
KVFLTAQNNPFAIGQGSAYPIITTAGGNIIVGNAVSLPFNVTANEGGFVRWQITGNSFVLLTIEPTGDVTIDNIIKILIN
TPVGNVIVNTLVGQR
>Mature_175_residues
MMFTCDNTSVNVGGNISGSNITFDLGNNKVTYTGSATPTGELIINVFYDTINAGQTGNANSRNIVLASGSTFDLSNVSSI
KVFLTAQNNPFAIGQGSAYPIITTAGGNIIVGNAVSLPFNVTANEGGFVRWQITGNSFVLLTIEPTGDVTIDNIIKILIN
TPVGNVIVNTLVGQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18249; Mature: 18249

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFTCDNTSVNVGGNISGSNITFDLGNNKVTYTGSATPTGELIINVFYDTINAGQTGNAN
CEEECCCCEEEECCEECCCEEEEECCCCEEEEECCCCCCCEEEEEEEEECCCCCCCCCCC
SRNIVLASGSTFDLSNVSSIKVFLTAQNNPFAIGQGSAYPIITTAGGNIIVGNAVSLPFN
CCEEEEECCCEECCCCCCEEEEEEEECCCCEEEECCCCCEEEEECCCCEEECCEEECEEE
VTANEGGFVRWQITGNSFVLLTIEPTGDVTIDNIIKILINTPVGNVIVNTLVGQR
EEECCCCEEEEEECCCEEEEEEECCCCCEEHHHEEEEEECCCCCHHHHHHHCCCC
>Mature Secondary Structure
MMFTCDNTSVNVGGNISGSNITFDLGNNKVTYTGSATPTGELIINVFYDTINAGQTGNAN
CEEECCCCEEEECCEECCCEEEEECCCCEEEEECCCCCCCEEEEEEEEECCCCCCCCCCC
SRNIVLASGSTFDLSNVSSIKVFLTAQNNPFAIGQGSAYPIITTAGGNIIVGNAVSLPFN
CCEEEEECCCEECCCCCCEEEEEEEECCCCEEEECCCCCEEEEECCCCEEECCEEECEEE
VTANEGGFVRWQITGNSFVLLTIEPTGDVTIDNIIKILINTPVGNVIVNTLVGQR
EEECCCCEEEEEECCCEEEEEEECCCCCEEHHHEEEEEECCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA