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The map label for this gene is 15892966

Identifier: 15892966

GI number: 15892966

Start: 967381

End: 967974

Strand: Reverse

Name: 15892966

Synonym: RC1043

Alternate gene names: NA

Gene position: 967974-967381 (Counterclockwise)

Preceding gene: 15892967

Following gene: 15892965

Centisome position: 76.29

GC content: 37.88

Gene sequence:

>594_bases
ATGGCCATGGCGGGACATCACGCTACTTTACTTAGAACAACAGTACAAGAATTATTACTGTATACCGGTATTTATATTAC
AGATTGGACGGAAGCCAGTTATGTGCCGCTTGAAGCAGGGCATTTTGATATGGATGATTATATTGATTACGTAATGGAGT
GTATCAATTTTATAGGACCGAATGTTCATACTATGGCAGTTTGCCAACCTACTGTTCCATTGCTTGCCGCCATTAGCTTA
ATGTCGGAGAGTAATAGTCCAAATGTGCCGAGTTCGATGATTTTGATGGGCGGCCCTATAGATGCTAGAAAAAATCCCAC
GGCAGTTAATGAATTCGCTCAAAGTAAAAGTTTAGAATGGTTCTGCCAAATGGTAATGCAGGTGCCGCCAAACTATCCCG
GTTTCCTCCAACTTGCCGTCTTTATGGGTTTAAACTTATGTCGTCATATAGATTCACATTTAGAATTATGGCAAAGTTTA
TTAAATTCTGACTATAAAAAAGCCGATCATACTATTAAATTTTATTATGAGTATTTAGCAGGTATGAATATGCCGGCAGA
GTTTTACTTACAAACTATAGATGAAGTATTCTAA

Upstream 100 bases:

>100_bases
TAATGAAAAAGTTATACTAAAAAAGTCTTTTTGTGAACTAAGGCATTTTTAGAAAATAGGTTTTAAAAAAGAATTACCTC
AATTATTAATAGTAGCACCC

Downstream 100 bases:

>100_bases
CAATTTTCGTTAGCAACAGGTAAATTAGTTTCTGAGAAGCGTCCGATCGATTTAAAACATATTACTAAATGTGTTTTACT
CGGTATTGAAGGGGAATTAG

Product: hypothetical protein

Products: NA

Alternate protein names: Intracellular PHB Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase; Polyhydroxyalkanoate Depolymerase; PHB Depolymerase; Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Intracellular Poly(3-Hydroxybutyrate) Depolymerase; Intracellular Polyhydroxyalkanoate Depolymerase; Polyhydroxyalkanoate Depolymerase Intracellular Subfamily; Poly(3-Hydroxyalkanoate) Depolymerase; PHB De-Polymerase Domain-Containing Protein; Poly(3-Hydroxybutyrate) Depolymerase; Intracellular PHB Depolymerase Protein; Poly-Beta-Hydroxyalkanoate Depolymerase-Like Protein; Intracellular Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Poly[D(-)-3-Hydroxybutyrate](Phb) Depolymerase; Poly-Beta-Hydroxyalkanoate/Butyrate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase Protein; Poly[D(-)-3-Hydroxyalkanoate] Depolymerase; Polyhydroxybutanoate Depolymerase; Poly-Beta-Hydroxybutyrate Depolymerase

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MAMAGHHATLLRTTVQELLLYTGIYITDWTEASYVPLEAGHFDMDDYIDYVMECINFIGPNVHTMAVCQPTVPLLAAISL
MSESNSPNVPSSMILMGGPIDARKNPTAVNEFAQSKSLEWFCQMVMQVPPNYPGFLQLAVFMGLNLCRHIDSHLELWQSL
LNSDYKKADHTIKFYYEYLAGMNMPAEFYLQTIDEVF

Sequences:

>Translated_197_residues
MAMAGHHATLLRTTVQELLLYTGIYITDWTEASYVPLEAGHFDMDDYIDYVMECINFIGPNVHTMAVCQPTVPLLAAISL
MSESNSPNVPSSMILMGGPIDARKNPTAVNEFAQSKSLEWFCQMVMQVPPNYPGFLQLAVFMGLNLCRHIDSHLELWQSL
LNSDYKKADHTIKFYYEYLAGMNMPAEFYLQTIDEVF
>Mature_196_residues
AMAGHHATLLRTTVQELLLYTGIYITDWTEASYVPLEAGHFDMDDYIDYVMECINFIGPNVHTMAVCQPTVPLLAAISLM
SESNSPNVPSSMILMGGPIDARKNPTAVNEFAQSKSLEWFCQMVMQVPPNYPGFLQLAVFMGLNLCRHIDSHLELWQSLL
NSDYKKADHTIKFYYEYLAGMNMPAEFYLQTIDEVF

Specific function: Unknown

COG id: COG4553

COG function: function code I; Poly-beta-hydroxyalkanoate depolymerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22334; Mature: 22203

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMAGHHATLLRTTVQELLLYTGIYITDWTEASYVPLEAGHFDMDDYIDYVMECINFIGP
CCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
NVHTMAVCQPTVPLLAAISLMSESNSPNVPSSMILMGGPIDARKNPTAVNEFAQSKSLEW
CCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCHHH
FCQMVMQVPPNYPGFLQLAVFMGLNLCRHIDSHLELWQSLLNSDYKKADHTIKFYYEYLA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
GMNMPAEFYLQTIDEVF
CCCCCHHHHHHHHHHHC
>Mature Secondary Structure 
AMAGHHATLLRTTVQELLLYTGIYITDWTEASYVPLEAGHFDMDDYIDYVMECINFIGP
CCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
NVHTMAVCQPTVPLLAAISLMSESNSPNVPSSMILMGGPIDARKNPTAVNEFAQSKSLEW
CCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCHHH
FCQMVMQVPPNYPGFLQLAVFMGLNLCRHIDSHLELWQSLLNSDYKKADHTIKFYYEYLA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
GMNMPAEFYLQTIDEVF
CCCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA