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The map label for this gene is 15892941

Identifier: 15892941

GI number: 15892941

Start: 942771

End: 943343

Strand: Reverse

Name: 15892941

Synonym: RC1018

Alternate gene names: NA

Gene position: 943343-942771 (Counterclockwise)

Preceding gene: 15892942

Following gene: 15892933

Centisome position: 74.35

GC content: 36.82

Gene sequence:

>573_bases
ATGTTTATTCAAACTGAAGATACCCCAAATCCGGATGCAATAACATTTTTCCCAGGGCAGGAAATAAGTAGTGATCAGCC
GGTATTTTTTAGTGAGCTTGCTGAAGTAAAAGGAAGAAGCAAACTTGCAGAATCATTATTTTATATTAATAATGTAAAAT
CGGTGTTTTTCGGTAGTGATTTTATAACAGTAACTAAACAAGCTGAAGGTAATTGGCAAGTTATAAAGCCTGAAATTTTA
ATGGTTATTATGGATCATTTTGTTTCAGGCTTTCCTGTATTTGAAGAAAACACCAAAGCAGATAATGTAAATCATAACCT
TGATGGGCTTTCGGAAATAGAGAAGCAAATCGTAGAGATTATTGAAACTAGGGTGCGTCCATCTGTTGCACAAGACGGCG
GCGACATAATATATAAAGGCTTTGAAAACGGTGTAGTTAAATTAGCACTTCGTGGTGCATGCCTTGGATGTCCTAGTTCC
ACCATCACCTTAAAAAACGGCATTGAGTCCATGCTTAAACATTTTGTACCGGAAGTGCAAGAAGTTGAAGCTGTAGAGGA
AGGTTTTGAGTAA

Upstream 100 bases:

>100_bases
TACTTTTGAGTGCCATGTAAAAATGCCTAAATACAAATATATTGTAAAAGTAGTACTATCAATTTATAATAATCAACAAA
TTTATTAGTGTGCTTTAATT

Downstream 100 bases:

>100_bases
TTTAGTATGCTAACTTTGTTAGTCTTCGTCATTGCAAGAAGAAACTGCAAGTTTCGACGAAGCAATCTAGTAAAAATTTC
TGATTTACAGAATTTTTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NifU Domain Protein; NifU Domain-Containing Protein; Nitrogen-Fixing NifU Domain Protein; Nitrogen-Fixing NifU-Like; Nitrogen Fixation Protein; NifU Related Protein; NifU-Like Protein; NifU-Like Domain Protein; NifU-Like Domain-Containing Protein; NifU Protein; Nitrogen-Fixing NifU-Like Protein; Scaffold Protein Nfu/Nifu; NifU Family Protein; Thioredoxin-Like Protein; Nitrogen-Fixing NifU; NifU Iron-Sulphur Cluster Scaffold Protein; Nif System Fes Cluster Assembly Nifu Family Protein; Thioredoxin-Related Protein; Thioredoxin-Like Domain Protein; Scaffold Protein Nfu/NifU N Terminal Domain Protein; Nitrogen-Fixing Nifu Domain Protein; Nitrogen-Fixing Protein NifU; Nitrogen-Fixing NifU Domain-Containing Protein; Nitrogen Fixing Thioredoxin-Like Protein NifU; Nitrogen-Fixing Protein; NFU1 Iron-Sulfur Cluster Scaffold-Like Protein; Fe-S Cluster Assembly Protein NFU; Nifu Protein; NifU Domain Containing Protein; HIRA-Interacting; Nitrogen-Fixing NifU C-Terminal; Scaffold Protein Nfu/NifU-Like Protein; Scaffold Protein Nfu/NifU N Terminal; NitrogeN-Fixing Nifu Domain Protein; Thioredoxin

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MFIQTEDTPNPDAITFFPGQEISSDQPVFFSELAEVKGRSKLAESLFYINNVKSVFFGSDFITVTKQAEGNWQVIKPEIL
MVIMDHFVSGFPVFEENTKADNVNHNLDGLSEIEKQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGCPSS
TITLKNGIESMLKHFVPEVQEVEAVEEGFE

Sequences:

>Translated_190_residues
MFIQTEDTPNPDAITFFPGQEISSDQPVFFSELAEVKGRSKLAESLFYINNVKSVFFGSDFITVTKQAEGNWQVIKPEIL
MVIMDHFVSGFPVFEENTKADNVNHNLDGLSEIEKQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGCPSS
TITLKNGIESMLKHFVPEVQEVEAVEEGFE
>Mature_190_residues
MFIQTEDTPNPDAITFFPGQEISSDQPVFFSELAEVKGRSKLAESLFYINNVKSVFFGSDFITVTKQAEGNWQVIKPEIL
MVIMDHFVSGFPVFEENTKADNVNHNLDGLSEIEKQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGCPSS
TITLKNGIESMLKHFVPEVQEVEAVEEGFE

Specific function: Unknown

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI50593025, Length=186, Percent_Identity=50.5376344086022, Blast_Score=187, Evalue=4e-48,
Organism=Homo sapiens, GI50593021, Length=186, Percent_Identity=50.5376344086022, Blast_Score=187, Evalue=4e-48,
Organism=Homo sapiens, GI50593023, Length=102, Percent_Identity=50.9803921568627, Blast_Score=113, Evalue=9e-26,
Organism=Homo sapiens, GI50593019, Length=102, Percent_Identity=50.9803921568627, Blast_Score=113, Evalue=9e-26,
Organism=Caenorhabditis elegans, GI17541876, Length=190, Percent_Identity=48.4210526315789, Blast_Score=175, Evalue=1e-44,
Organism=Saccharomyces cerevisiae, GI6322811, Length=203, Percent_Identity=36.9458128078818, Blast_Score=115, Evalue=4e-27,
Organism=Drosophila melanogaster, GI45551492, Length=185, Percent_Identity=44.8648648648649, Blast_Score=176, Evalue=6e-45,
Organism=Drosophila melanogaster, GI24643765, Length=185, Percent_Identity=44.8648648648649, Blast_Score=176, Evalue=6e-45,
Organism=Drosophila melanogaster, GI45556188, Length=185, Percent_Identity=44.8648648648649, Blast_Score=176, Evalue=6e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21122; Mature: 21122

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIQTEDTPNPDAITFFPGQEISSDQPVFFSELAEVKGRSKLAESLFYINNVKSVFFGSD
CCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FITVTKQAEGNWQVIKPEILMVIMDHFVSGFPVFEENTKADNVNHNLDGLSEIEKQIVEI
EEEEEEECCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
IETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGCPSSTITLKNGIESMLKHFVPEVQ
HHHHCCCCHHCCCCCEEEECCCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHCCHHH
EVEAVEEGFE
HHHHHHHCCC
>Mature Secondary Structure
MFIQTEDTPNPDAITFFPGQEISSDQPVFFSELAEVKGRSKLAESLFYINNVKSVFFGSD
CCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FITVTKQAEGNWQVIKPEILMVIMDHFVSGFPVFEENTKADNVNHNLDGLSEIEKQIVEI
EEEEEEECCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
IETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGCPSSTITLKNGIESMLKHFVPEVQ
HHHHCCCCHHCCCCCEEEECCCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHCCHHH
EVEAVEEGFE
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA