| Definition | Rickettsia conorii str. Malish 7, complete genome. |
|---|---|
| Accession | NC_003103 |
| Length | 1,268,755 |
Click here to switch to the map view.
The map label for this gene is 15892847
Identifier: 15892847
GI number: 15892847
Start: 869442
End: 869762
Strand: Reverse
Name: 15892847
Synonym: RC0924
Alternate gene names: NA
Gene position: 869762-869442 (Counterclockwise)
Preceding gene: 15892848
Following gene: 15892846
Centisome position: 68.55
GC content: 29.6
Gene sequence:
>321_bases ATGCAAGCTGGCATTATGTTTTTGTATTTTTTAGCCTTACCGATAATATATTATAAAGTTTTACCTGAAATAAATTCTTA TATAGATTTTTCCCAAAGCAGTAAATATTTTGAGGTTTTGCAGGTAATTATTAAAGATAAAATTCTTTGGTTATATGCTT TTATCATCGGTGCATTTAACGGCATATATTACGGCTTTTTCATAGAAGCTCCTTTTATTTTGATTGATAAAATGAAAGTT TCGCCATCTTTTTACGGTAAATTAGCGTTTTTGTTATCTTTTGCCGCTATCTTTGGAGGCTTTTTAGGAGGGGGTATTTA A
Upstream 100 bases:
>100_bases TATCAAGGCTTAGAGTTATCATATGTCTATGCTAGCTTATCTCCGTGGCTGTTATTTATCCCTTCTCTAGGTTCATCTAT AGGGGACTATATTATAGAAT
Downstream 100 bases:
>100_bases TAAAAAAACGCCATGTACACGATAAAAAAGTTATGGGTTTAGGATTTATTTTTAGTTTGTGCGGTTGTGTATATTATTTG CGGTAAATGCTTTTATATTA
Product: putative bicyclomycin resistance protein (Bcr1)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MQAGIMFLYFLALPIIYYKVLPEINSYIDFSQSSKYFEVLQVIIKDKILWLYAFIIGAFNGIYYGFFIEAPFILIDKMKV SPSFYGKLAFLLSFAAIFGGFLGGGI
Sequences:
>Translated_106_residues MQAGIMFLYFLALPIIYYKVLPEINSYIDFSQSSKYFEVLQVIIKDKILWLYAFIIGAFNGIYYGFFIEAPFILIDKMKV SPSFYGKLAFLLSFAAIFGGFLGGGI >Mature_106_residues MQAGIMFLYFLALPIIYYKVLPEINSYIDFSQSSKYFEVLQVIIKDKILWLYAFIIGAFNGIYYGFFIEAPFILIDKMKV SPSFYGKLAFLLSFAAIFGGFLGGGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y924_RICCN (Q92H48)
Other databases:
- EMBL: AE006914 - PIR: D97815 - RefSeq: NP_360561.1 - GeneID: 927892 - GenomeReviews: AE006914_GR - KEGG: rco:RC0924 - NMPDR: fig|272944.1.peg.924 - BioCyc: RCON272944:RC0924-MONOMER - InterPro: IPR016196
Pfam domain/function: SSF103473 MFS_gen_substrate_transporter
EC number: NA
Molecular weight: Translated: 12072; Mature: 12072
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAGIMFLYFLALPIIYYKVLPEINSYIDFSQSSKYFEVLQVIIKDKILWLYAFIIGAFN CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GIYYGFFIEAPFILIDKMKVSPSFYGKLAFLLSFAAIFGGFLGGGI HHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQAGIMFLYFLALPIIYYKVLPEINSYIDFSQSSKYFEVLQVIIKDKILWLYAFIIGAFN CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GIYYGFFIEAPFILIDKMKVSPSFYGKLAFLLSFAAIFGGFLGGGI HHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11557893