| Definition | Rickettsia conorii str. Malish 7, complete genome. |
|---|---|
| Accession | NC_003103 |
| Length | 1,268,755 |
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The map label for this gene is 15892788
Identifier: 15892788
GI number: 15892788
Start: 815648
End: 816178
Strand: Reverse
Name: 15892788
Synonym: RC0865
Alternate gene names: NA
Gene position: 816178-815648 (Counterclockwise)
Preceding gene: 15892789
Following gene: 15892787
Centisome position: 64.33
GC content: 32.02
Gene sequence:
>531_bases ATGCTAAAAACATTACTAATTAGTTTTATAACTTTAATTTGTGCAGTAAACTATGCTGATGCTGACCAAACAGCTCAAAA TCCTAATTCTACAACTTCTTCTTCTGATCAGCCCGATGATTTACCTGCAGAGGCAGCCGTTCACTTTGCACAGCCTTGGG CAAGACCTACAACAAATGTGCAAGGTAAAGTTAGCAATTCTGCTATGTATTTTACATTAATAAATAGTAGAAGTAAGAGT TATAATTTAGTGAATATATCTTCAGATAAGATAAGTGGAATAGAAATTCATCAAACAATTAATGATCAAGGGGTTAGTAA AATGGTAAAAGTGGATTATCCATTTTTAATTGCCGGTAATATTAATGTTGATTTTAAGCCCGGTGACATGCATATTATGC TTTATGACCCAAAAGTAGATTTAAATGTAGGAGATGAGTTTAAAATAACCTTTTTCTTTGATGACAATACACGAAAAATA GTGAATGTTAAAGTTGCAAATGACAATCCGTATAATAAAACGGGGAATTGA
Upstream 100 bases:
>100_bases AGAGATTACCACAAGAAGTGTACAAAAAATATCTTTTAAAAAACTAGATTTATATTTAATCTATGTTAATATTTCATTTT AATTTATTAAGGGTATTATT
Downstream 100 bases:
>100_bases AGGTTATTGTTGCATTGTGCACTCTTCTATGTCATGCCCACAAAGGCGGAAATCCAGTAAAACCTATAAAAAACTTGTTT TTTTAGGTTTAATGTGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MLKTLLISFITLICAVNYADADQTAQNPNSTTSSSDQPDDLPAEAAVHFAQPWARPTTNVQGKVSNSAMYFTLINSRSKS YNLVNISSDKISGIEIHQTINDQGVSKMVKVDYPFLIAGNINVDFKPGDMHIMLYDPKVDLNVGDEFKITFFFDDNTRKI VNVKVANDNPYNKTGN
Sequences:
>Translated_176_residues MLKTLLISFITLICAVNYADADQTAQNPNSTTSSSDQPDDLPAEAAVHFAQPWARPTTNVQGKVSNSAMYFTLINSRSKS YNLVNISSDKISGIEIHQTINDQGVSKMVKVDYPFLIAGNINVDFKPGDMHIMLYDPKVDLNVGDEFKITFFFDDNTRKI VNVKVANDNPYNKTGN >Mature_176_residues MLKTLLISFITLICAVNYADADQTAQNPNSTTSSSDQPDDLPAEAAVHFAQPWARPTTNVQGKVSNSAMYFTLINSRSKS YNLVNISSDKISGIEIHQTINDQGVSKMVKVDYPFLIAGNINVDFKPGDMHIMLYDPKVDLNVGDEFKITFFFDDNTRKI VNVKVANDNPYNKTGN
Specific function: Unknown
COG id: COG2847
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007410 [H]
Pfam domain/function: PF04314 DUF461 [H]
EC number: NA
Molecular weight: Translated: 19527; Mature: 19527
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTLLISFITLICAVNYADADQTAQNPNSTTSSSDQPDDLPAEAAVHFAQPWARPTTNV CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC QGKVSNSAMYFTLINSRSKSYNLVNISSDKISGIEIHQTINDQGVSKMVKVDYPFLIAGN CEEECCCEEEEEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCCCEEEEECCCEEEECC INVDFKPGDMHIMLYDPKVDLNVGDEFKITFFFDDNTRKIVNVKVANDNPYNKTGN EEEEEECCCEEEEEECCEEECCCCCCEEEEEEEECCCEEEEEEEECCCCCCCCCCC >Mature Secondary Structure MLKTLLISFITLICAVNYADADQTAQNPNSTTSSSDQPDDLPAEAAVHFAQPWARPTTNV CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC QGKVSNSAMYFTLINSRSKSYNLVNISSDKISGIEIHQTINDQGVSKMVKVDYPFLIAGN CEEECCCEEEEEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCCCEEEEECCCEEEECC INVDFKPGDMHIMLYDPKVDLNVGDEFKITFFFDDNTRKIVNVKVANDNPYNKTGN EEEEEECCCEEEEEECCEEECCCCCCEEEEEEEECCCEEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]