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The map label for this gene is 15892759

Identifier: 15892759

GI number: 15892759

Start: 791768

End: 792106

Strand: Reverse

Name: 15892759

Synonym: RC0836

Alternate gene names: NA

Gene position: 792106-791768 (Counterclockwise)

Preceding gene: 15892760

Following gene: 15892757

Centisome position: 62.43

GC content: 30.38

Gene sequence:

>339_bases
GTGCAGCCGGATTACTTTACAGCAGATTATGATGTAGAGAATATGCACGTAAATATGAACAAGCATTATATTTTAGAGGA
AGCTTTAAAATTAAACCTACCTAAAAAGATAGTACCGATTCCGCATAAAATTACTTTGCCTAAAATAAATTTAGCAACAG
CAATAGATACATCAAAATATAACGATCTACAAAATAAGGTGCTTAGCAAATTTCAAGATATTATTGATACACATAATGAA
ACAAATGAAGAAGAGCTACTTGCCTATGAGCAGGAAATATTTTTAGAACTTGTAAAAGATCCAAAAACTATAGAGAAGCT
GAAAGTAATTGTGGGATAA

Upstream 100 bases:

>100_bases
TCCGGGTGGGGCGGTGTTACCGAAATGTTTGCTTGAAGTAATGGTAATAAAACTAAACTAATTAGAAATATCAGCAATAT
TATAGAGCAGAATAAAACAA

Downstream 100 bases:

>100_bases
ACTCCTACTATGTCATTCCTGCGAAAGCATGAATCCAGAAAAAGTAGTCTTAATATTGACAAAATAAACCTAAAAAAACA
AGTTTTTTGTAGGTTTTACT

Product: putative 3-hydroxyacyl-CoA dehydrogenase (FadB)

Products: 3-oxoacyl-CoA; NADH; H+

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MQPDYFTADYDVENMHVNMNKHYILEEALKLNLPKKIVPIPHKITLPKINLATAIDTSKYNDLQNKVLSKFQDIIDTHNE
TNEEELLAYEQEIFLELVKDPKTIEKLKVIVG

Sequences:

>Translated_112_residues
MQPDYFTADYDVENMHVNMNKHYILEEALKLNLPKKIVPIPHKITLPKINLATAIDTSKYNDLQNKVLSKFQDIIDTHNE
TNEEELLAYEQEIFLELVKDPKTIEKLKVIVG
>Mature_112_residues
MQPDYFTADYDVENMHVNMNKHYILEEALKLNLPKKIVPIPHKITLPKINLATAIDTSKYNDLQNKVLSKFQDIIDTHNE
TNEEELLAYEQEIFLELVKDPKTIEKLKVIVG

Specific function: Unknown

COG id: COG1024

COG function: function code I; Enoyl-CoA hydratase/carnithine racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y836_RICCN (Q92HD5)

Other databases:

- EMBL:   AE006914
- PIR:   D97804
- RefSeq:   NP_360473.1
- GeneID:   927799
- GenomeReviews:   AE006914_GR
- KEGG:   rco:RC0836
- NMPDR:   fig|272944.1.peg.836
- BioCyc:   RCON272944:RC0836-MONOMER

Pfam domain/function: NA

EC number: 1.1.1.35; 4.2.1.17

Molecular weight: Translated: 13051; Mature: 13051

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPDYFTADYDVENMHVNMNKHYILEEALKLNLPKKIVPIPHKITLPKINLATAIDTSKY
CCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHCCCCHHH
NDLQNKVLSKFQDIIDTHNETNEEELLAYEQEIFLELVKDPKTIEKLKVIVG
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MQPDYFTADYDVENMHVNMNKHYILEEALKLNLPKKIVPIPHKITLPKINLATAIDTSKY
CCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHCCCCHHH
NDLQNKVLSKFQDIIDTHNETNEEELLAYEQEIFLELVKDPKTIEKLKVIVG
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: (S)-3-hydroxyacyl-CoA; NAD+

Specific reaction: (S)-3-hydroxyacyl-CoA + NAD+ = 3-oxoacyl-CoA + NADH + H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893