| Definition | Rickettsia conorii str. Malish 7, complete genome. |
|---|---|
| Accession | NC_003103 |
| Length | 1,268,755 |
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The map label for this gene is 15892753
Identifier: 15892753
GI number: 15892753
Start: 783913
End: 784464
Strand: Reverse
Name: 15892753
Synonym: RC0830
Alternate gene names: NA
Gene position: 784464-783913 (Counterclockwise)
Preceding gene: 15892754
Following gene: 15892752
Centisome position: 61.83
GC content: 27.36
Gene sequence:
>552_bases TTGTCAATTGTAATTAAAACTTTAGAGAAAAATACTGTAGTAAAAGAAATTGATTTATATGGCAGCAACCTTAGTAACGA TGATATAAAAAATCTAAGTAAAATTGTAAAGTTAAATCAAATATCACATTTAAACCTGAATTCTACTTCTTTAGATAGTG AAAAAATAAAAATTCTTATTGAGGCTTTAGCAGATAATACCTCTCTTGAATATTTATCTTTAAATTCTATTGCGCTGAAA ATAGAAGATTTAAGAATATTAATAGATGCTATTAAAAACCACCCTAATTTAAGTTCTTTAGCATTAGGTAGTAGTGCAGT AGGAAATAAAGGAGCAGCAATTATTAGTGAGTTGTTTCATTCAAAACTACCGTTAAAGTCCTTAGATATAGGACAAATGA ATATTACTGCCGAAGGGATAGACGTTATCGCAAATAATATTAGCAGTGCAAAATTAATGTCGTTAAATTTAGGGTATAAT AACCTTAGAAACGAGGGAGTCATAAAATTACTGCATGCTTTAATGGCTAATCAATATATTATAAAGAATTAA
Upstream 100 bases:
>100_bases AAATTGACCTTAGTCGAAATGATTTATTGTTGCAGAAAATTAAGAATAATGATCCTGAAATTGTTCGTGTAGAACTACCT TTGAAGAAGATAGTAGTTTT
Downstream 100 bases:
>100_bases TATTAAATGAAACAAGAATCTCCGAAAAAAGTGCAGAAGTAATTTAAGGTTTTTTAACCTCACGCCTATTGATACTTTAG ATTTAAAACAAATAACTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MSIVIKTLEKNTVVKEIDLYGSNLSNDDIKNLSKIVKLNQISHLNLNSTSLDSEKIKILIEALADNTSLEYLSLNSIALK IEDLRILIDAIKNHPNLSSLALGSSAVGNKGAAIISELFHSKLPLKSLDIGQMNITAEGIDVIANNISSAKLMSLNLGYN NLRNEGVIKLLHALMANQYIIKN
Sequences:
>Translated_183_residues MSIVIKTLEKNTVVKEIDLYGSNLSNDDIKNLSKIVKLNQISHLNLNSTSLDSEKIKILIEALADNTSLEYLSLNSIALK IEDLRILIDAIKNHPNLSSLALGSSAVGNKGAAIISELFHSKLPLKSLDIGQMNITAEGIDVIANNISSAKLMSLNLGYN NLRNEGVIKLLHALMANQYIIKN >Mature_182_residues SIVIKTLEKNTVVKEIDLYGSNLSNDDIKNLSKIVKLNQISHLNLNSTSLDSEKIKILIEALADNTSLEYLSLNSIALKI EDLRILIDAIKNHPNLSSLALGSSAVGNKGAAIISELFHSKLPLKSLDIGQMNITAEGIDVIANNISSAKLMSLNLGYNN LRNEGVIKLLHALMANQYIIKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI118918429, Length=174, Percent_Identity=27.0114942528736, Blast_Score=70, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19946; Mature: 19815
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIVIKTLEKNTVVKEIDLYGSNLSNDDIKNLSKIVKLNQISHLNLNSTSLDSEKIKILI CCEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEECCCCCCCCCHHHHHHHH EALADNTSLEYLSLNSIALKIEDLRILIDAIKNHPNLSSLALGSSAVGNKGAAIISELFH HHHHCCCCEEEEEECEEEEEHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHH SKLPLKSLDIGQMNITAEGIDVIANNISSAKLMSLNLGYNNLRNEGVIKLLHALMANQYI CCCCCCCCCCCCEEEEHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCEE IKN CCC >Mature Secondary Structure SIVIKTLEKNTVVKEIDLYGSNLSNDDIKNLSKIVKLNQISHLNLNSTSLDSEKIKILI CEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEECCCCCCCCCHHHHHHHH EALADNTSLEYLSLNSIALKIEDLRILIDAIKNHPNLSSLALGSSAVGNKGAAIISELFH HHHHCCCCEEEEEECEEEEEHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHH SKLPLKSLDIGQMNITAEGIDVIANNISSAKLMSLNLGYNNLRNEGVIKLLHALMANQYI CCCCCCCCCCCCEEEEHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCEE IKN CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA