Click here to switch to the map view.

The map label for this gene is 15892620

Identifier: 15892620

GI number: 15892620

Start: 671438

End: 672268

Strand: Reverse

Name: 15892620

Synonym: RC0697

Alternate gene names: NA

Gene position: 672268-671438 (Counterclockwise)

Preceding gene: 15892633

Following gene: 15892619

Centisome position: 52.99

GC content: 31.29

Gene sequence:

>831_bases
ATGAGATGTTCATCTTACTGTACTTCTTCCGAATATAAGATGAGTGATCTAGTTACTAATTTAAAAAAGATTGGTCTTGA
ACCTCAACATTTTGATGATGTTTTATATATTCGGAAAGAGATAAATAAAGATTCTGATTTTATAGAGATATTTTTCTTTC
CGTTTGGTTGTGTAACTATTTGGGGCGGCGATGAAATTCAAGAAAAAATAGTTTTAAGCGATACTGATTTAGTACCAGTA
AATAAGCTTAAAGAGCCGGTATCCGATTATATTTATTTTGAATATAATACGGAAGTCAAGAAAACATTTATTGATGAAGA
AAAAAATAAAATAATCTTAGCAGATAAATCAGTTTTTGTTAAACTTTCTATTTCCCATGCTCTTGCACAATCGGTTAAAC
TTAGTGTTCTTGAGCAATCTGTTAGTAACTTGATTGTTCAGACAACCCCTATACAACAGGAACTAGCTAGAACCGGTAGC
GTATCGCTTTCTAAAAAGGAGATATTACAGCAAATAGGTATATTATTTAACGAGCGTTATTCAATCAGTTTGCATAGCGA
TATATTCGATACTCCAGAATTTTTTTGGCGTCGTCCGAGTTATGAGCCTCTATATCTCATGACAGCAGAGTTTCAAGACA
TAGAAATACGGCAAAATATAATGAATCATCGTCTTAATATGATTCACGAACTTTTAAACATTCTTTCAAACGATCTTAAT
TATAAACATTCCACCAAACTTGAGTGGATTATTATTATTTTAATCGGTCTTGAAGTGGTTCTGTCGTTATCTCATACTAA
TCTTTTCTTAAAAATTATCGGAGCTTTATAA

Upstream 100 bases:

>100_bases
GTCTCTATTACTTAATATTTCATACATAATTATAATATTATTGACTTTATAGGTTCCTAACTACTATACTCTAAATTTAT
ATAAATTAAACGTAATAATC

Downstream 100 bases:

>100_bases
ATAGCTTCTATGCAAATTATCGATAATCAAAAAACATTAGAAGGATTTTGTAACCGGTTAGCAAATAAGGCATGCTTAAG
CATAGATACGGAATTTGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MRCSSYCTSSEYKMSDLVTNLKKIGLEPQHFDDVLYIRKEINKDSDFIEIFFFPFGCVTIWGGDEIQEKIVLSDTDLVPV
NKLKEPVSDYIYFEYNTEVKKTFIDEEKNKIILADKSVFVKLSISHALAQSVKLSVLEQSVSNLIVQTTPIQQELARTGS
VSLSKKEILQQIGILFNERYSISLHSDIFDTPEFFWRRPSYEPLYLMTAEFQDIEIRQNIMNHRLNMIHELLNILSNDLN
YKHSTKLEWIIIILIGLEVVLSLSHTNLFLKIIGAL

Sequences:

>Translated_276_residues
MRCSSYCTSSEYKMSDLVTNLKKIGLEPQHFDDVLYIRKEINKDSDFIEIFFFPFGCVTIWGGDEIQEKIVLSDTDLVPV
NKLKEPVSDYIYFEYNTEVKKTFIDEEKNKIILADKSVFVKLSISHALAQSVKLSVLEQSVSNLIVQTTPIQQELARTGS
VSLSKKEILQQIGILFNERYSISLHSDIFDTPEFFWRRPSYEPLYLMTAEFQDIEIRQNIMNHRLNMIHELLNILSNDLN
YKHSTKLEWIIIILIGLEVVLSLSHTNLFLKIIGAL
>Mature_276_residues
MRCSSYCTSSEYKMSDLVTNLKKIGLEPQHFDDVLYIRKEINKDSDFIEIFFFPFGCVTIWGGDEIQEKIVLSDTDLVPV
NKLKEPVSDYIYFEYNTEVKKTFIDEEKNKIILADKSVFVKLSISHALAQSVKLSVLEQSVSNLIVQTTPIQQELARTGS
VSLSKKEILQQIGILFNERYSISLHSDIFDTPEFFWRRPSYEPLYLMTAEFQDIEIRQNIMNHRLNMIHELLNILSNDLN
YKHSTKLEWIIIILIGLEVVLSLSHTNLFLKIIGAL

Specific function: Unknown

COG id: COG1723

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI157388927, Length=278, Percent_Identity=32.0143884892086, Blast_Score=125, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI71996861, Length=234, Percent_Identity=23.5042735042735, Blast_Score=79, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6320203, Length=292, Percent_Identity=37.6712328767123, Blast_Score=167, Evalue=2e-42,
Organism=Saccharomyces cerevisiae, GI6321163, Length=255, Percent_Identity=30.5882352941176, Blast_Score=120, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6320488, Length=152, Percent_Identity=31.5789473684211, Blast_Score=91, Evalue=2e-19,
Organism=Drosophila melanogaster, GI18859701, Length=300, Percent_Identity=29, Blast_Score=118, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32007; Mature: 32007

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCSSYCTSSEYKMSDLVTNLKKIGLEPQHFDDVLYIRKEINKDSDFIEIFFFPFGCVTI
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCEEEE
WGGDEIQEKIVLSDTDLVPVNKLKEPVSDYIYFEYNTEVKKTFIDEEKNKIILADKSVFV
ECCCHHHHEEEECCCCCCCHHHHHCCHHCEEEEEECCHHHHHHHCCCCCEEEEECCCEEE
KLSISHALAQSVKLSVLEQSVSNLIVQTTPIQQELARTGSVSLSKKEILQQIGILFNERY
EEEHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCE
SISLHSDIFDTPEFFWRRPSYEPLYLMTAEFQDIEIRQNIMNHRLNMIHELLNILSNDLN
EEEECCCCCCCHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
YKHSTKLEWIIIILIGLEVVLSLSHTNLFLKIIGAL
CCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCCC
>Mature Secondary Structure
MRCSSYCTSSEYKMSDLVTNLKKIGLEPQHFDDVLYIRKEINKDSDFIEIFFFPFGCVTI
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCEEEE
WGGDEIQEKIVLSDTDLVPVNKLKEPVSDYIYFEYNTEVKKTFIDEEKNKIILADKSVFV
ECCCHHHHEEEECCCCCCCHHHHHCCHHCEEEEEECCHHHHHHHCCCCCEEEEECCCEEE
KLSISHALAQSVKLSVLEQSVSNLIVQTTPIQQELARTGSVSLSKKEILQQIGILFNERY
EEEHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCE
SISLHSDIFDTPEFFWRRPSYEPLYLMTAEFQDIEIRQNIMNHRLNMIHELLNILSNDLN
EEEECCCCCCCHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
YKHSTKLEWIIIILIGLEVVLSLSHTNLFLKIIGAL
CCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA