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The map label for this gene is kpsF [C]

Identifier: 15892584

GI number: 15892584

Start: 641425

End: 642384

Strand: Reverse

Name: kpsF [C]

Synonym: RC0661

Alternate gene names: 15892584

Gene position: 642384-641425 (Counterclockwise)

Preceding gene: 15892585

Following gene: 15892583

Centisome position: 50.63

GC content: 32.29

Gene sequence:

>960_bases
ATGACCAACACAAATAATTACCGAATCATCGCAAAGAGGGTTATTTCTAGTGAAGCAAGTGCTTTAGAAAAATTATCCGA
AAATATCCCTGAAGACTTTAACAGAATTATAGAATTTTTATTATCTTTCAAAGGACGGATAATCCTAACCGGCATAGGCA
AAAGCGGTTATATTGCAAGAAAAATAGCTGCTAGCTTTTCTTCAACCGGTATGCCTGCTTTTTATTTACATCCGGCAGAA
GCAAGTCACGGCGATTTAGGTATGGTGACGAGAAATGATCTAGTAATTATGTTATCTAATTCCGGCGAAACTAAAGAACT
ATTTAATATAATTGAATATTGCAAGAACTCTTCCATAAAAATTGCTGCAATGACAATGAATAAAAATTCTACTTTAGCTA
AAAGAAGTGATTTTTTATTAATAGTACCTGAATACCCAGAAGCTTCTGTAATTGAAGTTCCTACTATATCATCTTTAATC
ATGCTATCACTTGGTGATGCTTTAATGACTGTTATACATGAAAAACGAGGCTTTACTAAAGATGATTTTAAAATTTATCA
TCCGGGAGGTACAATCGGCGCTAATTTAACAAAAATTAAACACCTAATGCGTAGCGGTGATGAAATACCTTTAGTATATG
AAGATACTTCCTTTGCCAAAACTATAATTATTATGAGTAAAAAACGTTTAGGTTGTACGCTTGTAACAGATAAAAACCAA
AATTTGGTGGGAATTATAACTGATGGGGATTTACGTCGTCATATTAACGATCAAATCCACTTAAAAACAGCATCAAGCAT
TATGACCAAAAACCCTATTCATATCTCATCGGAAATATTTGCAAAAGAGGCTTTAAATTTAATGAAAGCCAAGAATATCA
CTAATATACCGATTGTTGATGATAATATTATTATAGGCATTATTCATATTCATGATTTACTACGCATAGGGGTTAGCTAA

Upstream 100 bases:

>100_bases
CTGCTCGCAATGACGGTTCGGGTATCCACAAAAATAGCTCATAATACTAATAATTTGCTGGATACTGTGGACAAGCCACG
GTATGACAATGAGTAAATAA

Downstream 100 bases:

>100_bases
AATCTATGCCCTCTTCTTATAAACTGCGAAAAAAAATTTGGAAATCTGTATATCTTTTAATAACAGTTGGAATTTTATAT
ATAGGGTATATATTAATTAA

Product: kpsF protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MTNTNNYRIIAKRVISSEASALEKLSENIPEDFNRIIEFLLSFKGRIILTGIGKSGYIARKIAASFSSTGMPAFYLHPAE
ASHGDLGMVTRNDLVIMLSNSGETKELFNIIEYCKNSSIKIAAMTMNKNSTLAKRSDFLLIVPEYPEASVIEVPTISSLI
MLSLGDALMTVIHEKRGFTKDDFKIYHPGGTIGANLTKIKHLMRSGDEIPLVYEDTSFAKTIIIMSKKRLGCTLVTDKNQ
NLVGIITDGDLRRHINDQIHLKTASSIMTKNPIHISSEIFAKEALNLMKAKNITNIPIVDDNIIIGIIHIHDLLRIGVS

Sequences:

>Translated_319_residues
MTNTNNYRIIAKRVISSEASALEKLSENIPEDFNRIIEFLLSFKGRIILTGIGKSGYIARKIAASFSSTGMPAFYLHPAE
ASHGDLGMVTRNDLVIMLSNSGETKELFNIIEYCKNSSIKIAAMTMNKNSTLAKRSDFLLIVPEYPEASVIEVPTISSLI
MLSLGDALMTVIHEKRGFTKDDFKIYHPGGTIGANLTKIKHLMRSGDEIPLVYEDTSFAKTIIIMSKKRLGCTLVTDKNQ
NLVGIITDGDLRRHINDQIHLKTASSIMTKNPIHISSEIFAKEALNLMKAKNITNIPIVDDNIIIGIIHIHDLLRIGVS
>Mature_318_residues
TNTNNYRIIAKRVISSEASALEKLSENIPEDFNRIIEFLLSFKGRIILTGIGKSGYIARKIAASFSSTGMPAFYLHPAEA
SHGDLGMVTRNDLVIMLSNSGETKELFNIIEYCKNSSIKIAAMTMNKNSTLAKRSDFLLIVPEYPEASVIEVPTISSLIM
LSLGDALMTVIHEKRGFTKDDFKIYHPGGTIGANLTKIKHLMRSGDEIPLVYEDTSFAKTIIIMSKKRLGCTLVTDKNQN
LVGIITDGDLRRHINDQIHLKTASSIMTKNPIHISSEIFAKEALNLMKAKNITNIPIVDDNIIIGIIHIHDLLRIGVS

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=317, Percent_Identity=39.1167192429022, Blast_Score=245, Evalue=2e-66,
Organism=Escherichia coli, GI87082151, Length=312, Percent_Identity=36.8589743589744, Blast_Score=201, Evalue=4e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 35328; Mature: 35197

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNTNNYRIIAKRVISSEASALEKLSENIPEDFNRIIEFLLSFKGRIILTGIGKSGYIAR
CCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHH
KIAASFSSTGMPAFYLHPAEASHGDLGMVTRNDLVIMLSNSGETKELFNIIEYCKNSSIK
HHHHHHCCCCCCEEEEECCCCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCEE
IAAMTMNKNSTLAKRSDFLLIVPEYPEASVIEVPTISSLIMLSLGDALMTVIHEKRGFTK
EEEEEECCCCCCEECCCEEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCC
DDFKIYHPGGTIGANLTKIKHLMRSGDEIPLVYEDTSFAKTIIIMSKKRLGCTLVTDKNQ
CCCEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEECCCCCEEEEECCCC
NLVGIITDGDLRRHINDQIHLKTASSIMTKNPIHISSEIFAKEALNLMKAKNITNIPIVD
CEEEEEECCHHHHHCCCEEEEEEHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCCCCEEC
DNIIIGIIHIHDLLRIGVS
CCEEEEEEHHHHHHHHCCC
>Mature Secondary Structure 
TNTNNYRIIAKRVISSEASALEKLSENIPEDFNRIIEFLLSFKGRIILTGIGKSGYIAR
CCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHH
KIAASFSSTGMPAFYLHPAEASHGDLGMVTRNDLVIMLSNSGETKELFNIIEYCKNSSIK
HHHHHHCCCCCCEEEEECCCCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCEE
IAAMTMNKNSTLAKRSDFLLIVPEYPEASVIEVPTISSLIMLSLGDALMTVIHEKRGFTK
EEEEEECCCCCCEECCCEEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCC
DDFKIYHPGGTIGANLTKIKHLMRSGDEIPLVYEDTSFAKTIIIMSKKRLGCTLVTDKNQ
CCCEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEECCCCCEEEEECCCC
NLVGIITDGDLRRHINDQIHLKTASSIMTKNPIHISSEIFAKEALNLMKAKNITNIPIVD
CEEEEEECCHHHHHCCCEEEEEEHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCCCCEEC
DNIIIGIIHIHDLLRIGVS
CCEEEEEEHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]