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The map label for this gene is rnd2

Identifier: 15892510

GI number: 15892510

Start: 576312

End: 576923

Strand: Reverse

Name: rnd2

Synonym: RC0587

Alternate gene names: NA

Gene position: 576923-576312 (Counterclockwise)

Preceding gene: 15892511

Following gene: 15892509

Centisome position: 45.47

GC content: 29.25

Gene sequence:

>612_bases
ATGACTATAAAAATTTATCAAAACGACCTACCTAATAATTTTAAACTTGAAGGAGATCTAGCTATAGATACCGAGACAAT
GGGACTAAATCTACATAGAGATAAACTATGTTTGCTACAATTTAGTAACGGCAATGGTGAAGCTCATCTTGTCCATTTTA
CAAATCAAGATTATACAGCTCCTAATGTAAAAGCATTATTACTAGATAAAACTAGATGTAAGATATTTCATTTTGCTAGA
TTTGATCTAGCATCCATAAAAAAATATTTAAGTATAGATTTAGAAAATATCTTTTGTACTAAAATATCTTCAAAACTAGT
TAGAACTTATACCGATAGTCATGGGCTTAAGGATTTGTGCCGAGAATTGCTTAATATCAATATTTCAAAACAACAACAAT
CTTCCTATTGGGGTGCAGATAATTTATCTTCAGAACAAAAAGAATATGCAGCAAAAGATGTGCTTTATTTGCATCAGTTA
AAAGATATTTTACAAAAAATGCTACTTAAAGAAAATAGGTATGAACTTGCCCAAGATATTTTCCGTTTTTTACCGATAAG
AGCTAATTTAGACCTTATCGGTTGGAATGAAATCGATATTTTCATGCATTAA

Upstream 100 bases:

>100_bases
TATTTTTTTTTGATACCGTGGTCAAGCCACGGTATGACACAGAACGCGTTTTTCGATCCGCACAACAACATTATTGATTC
AAAGGAATTAAAAATCATTT

Downstream 100 bases:

>100_bases
TTTATTAATACCATTTATTGACTTCAGGTATAAAATCAGGCGCACTATTTAATAGTCTATTTTTTTTAAATTACTGAGCC
TACAATAGACTTATTGCATA

Product: ribonuclease D

Products: NA

Alternate protein names: Ribonuclease D; 3-5' Exonuclease Family Protein; RNAse D Protein; 3- 5' Exonuclease Family Protein; Exonuclease; Ribonuclease; 3-5' Exonuclease Domain-Containing Protein; RNAse D; Ribonuclease D 3-5' Exonuclease

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MTIKIYQNDLPNNFKLEGDLAIDTETMGLNLHRDKLCLLQFSNGNGEAHLVHFTNQDYTAPNVKALLLDKTRCKIFHFAR
FDLASIKKYLSIDLENIFCTKISSKLVRTYTDSHGLKDLCRELLNINISKQQQSSYWGADNLSSEQKEYAAKDVLYLHQL
KDILQKMLLKENRYELAQDIFRFLPIRANLDLIGWNEIDIFMH

Sequences:

>Translated_203_residues
MTIKIYQNDLPNNFKLEGDLAIDTETMGLNLHRDKLCLLQFSNGNGEAHLVHFTNQDYTAPNVKALLLDKTRCKIFHFAR
FDLASIKKYLSIDLENIFCTKISSKLVRTYTDSHGLKDLCRELLNINISKQQQSSYWGADNLSSEQKEYAAKDVLYLHQL
KDILQKMLLKENRYELAQDIFRFLPIRANLDLIGWNEIDIFMH
>Mature_202_residues
TIKIYQNDLPNNFKLEGDLAIDTETMGLNLHRDKLCLLQFSNGNGEAHLVHFTNQDYTAPNVKALLLDKTRCKIFHFARF
DLASIKKYLSIDLENIFCTKISSKLVRTYTDSHGLKDLCRELLNINISKQQQSSYWGADNLSSEQKEYAAKDVLYLHQLK
DILQKMLLKENRYELAQDIFRFLPIRANLDLIGWNEIDIFMH

Specific function: Unknown

COG id: COG0349

COG function: function code J; Ribonuclease D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.26.3

Molecular weight: Translated: 23675; Mature: 23543

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKIYQNDLPNNFKLEGDLAIDTETMGLNLHRDKLCLLQFSNGNGEAHLVHFTNQDYTA
CEEEEEECCCCCCEEEECCEEEECEECCCEECCCEEEEEEEECCCCCEEEEEECCCCCCC
PNVKALLLDKTRCKIFHFARFDLASIKKYLSIDLENIFCTKISSKLVRTYTDSHGLKDLC
CCEEEEEEECCCCEEEEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
RELLNINISKQQQSSYWGADNLSSEQKEYAAKDVLYLHQLKDILQKMLLKENRYELAQDI
HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FRFLPIRANLDLIGWNEIDIFMH
HHHCCCCCCEEEEECCEEEEEEC
>Mature Secondary Structure 
TIKIYQNDLPNNFKLEGDLAIDTETMGLNLHRDKLCLLQFSNGNGEAHLVHFTNQDYTA
EEEEEECCCCCCEEEECCEEEECEECCCEECCCEEEEEEEECCCCCEEEEEECCCCCCC
PNVKALLLDKTRCKIFHFARFDLASIKKYLSIDLENIFCTKISSKLVRTYTDSHGLKDLC
CCEEEEEEECCCCEEEEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
RELLNINISKQQQSSYWGADNLSSEQKEYAAKDVLYLHQLKDILQKMLLKENRYELAQDI
HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FRFLPIRANLDLIGWNEIDIFMH
HHHCCCCCCEEEEECCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA