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The map label for this gene is ycjL [C]

Identifier: 15892475

GI number: 15892475

Start: 543866

End: 544594

Strand: Reverse

Name: ycjL [C]

Synonym: RC0552

Alternate gene names: 15892475

Gene position: 544594-543866 (Counterclockwise)

Preceding gene: 15892476

Following gene: 15892473

Centisome position: 42.92

GC content: 34.71

Gene sequence:

>729_bases
ATGTATAAAAAACCGATAATAGGTGTTACACCTGATTTAGCTCAAAATTGTGAAAAATATACTTACGCTGCTTTTCCATG
GTACGCCTTGCGAAGAAACTATACCGATGCGATTATTGCAGCCGGCGGTGTACCGCTATTATTACCTTATCAAAGTGATA
CAATAAATCAGCTTATGGAACTTGTTGATGGTGTTGTAATGCCAGGCGGTGATGAGGACATACATCCTAAATTTTATGAG
CCGGAATACGCCGAAGATATAGTAGTTTCCAATGAAGAACGTGATAATTTTGAGATATTAGTTTTAAAGAAAGCATTAGA
GAGAGATATTCCGGTTTTAGGAATATGCCGAGGTATGCAGTTATTAAACGTTATTTTTAAGGGTACGCTTATTAAACATA
TTCCCGATTATATTGAAACTGTAATTAATCATACACAACCTTCGCCTAAAAACATCGTTTCGCATGCAATTAATATAGAA
GCAAATACTAAACTTGCTAAAATAGCTAATAACCAGCTACAAACTATGGTTAATTCGACTCATCACCAGGCTGCTAAACA
ACTTGGTAATGATCTTATCGTATCTGCAACAGCAGAAGATGGTATAATTGAAGCCATTGAATCAACGAAACATAAATTTG
TTATCGGCGTTCAATGGCATCCTGAATATCTTAACGATAATGGAGTAGATTTAGAATTATTTAAAGAATTCGTAAAAGTG
AGTAAGTAA

Upstream 100 bases:

>100_bases
GTCAGCATAAATGCTGGCTTGCAATGATAGGACCTTTATGAACTGTCCGGTACTATGAAGAATGACATAGCTAACAGAAA
AATAATAAAATGATAATAAA

Downstream 100 bases:

>100_bases
ATATTAGTTTTTAACATCATTAGATGAACATATTACAAACGCTTTATTATATTCATATCCAAACGGCCAACAACATACGG
AATTTTTAGAGCGTTCATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MYKKPIIGVTPDLAQNCEKYTYAAFPWYALRRNYTDAIIAAGGVPLLLPYQSDTINQLMELVDGVVMPGGDEDIHPKFYE
PEYAEDIVVSNEERDNFEILVLKKALERDIPVLGICRGMQLLNVIFKGTLIKHIPDYIETVINHTQPSPKNIVSHAINIE
ANTKLAKIANNQLQTMVNSTHHQAAKQLGNDLIVSATAEDGIIEAIESTKHKFVIGVQWHPEYLNDNGVDLELFKEFVKV
SK

Sequences:

>Translated_242_residues
MYKKPIIGVTPDLAQNCEKYTYAAFPWYALRRNYTDAIIAAGGVPLLLPYQSDTINQLMELVDGVVMPGGDEDIHPKFYE
PEYAEDIVVSNEERDNFEILVLKKALERDIPVLGICRGMQLLNVIFKGTLIKHIPDYIETVINHTQPSPKNIVSHAINIE
ANTKLAKIANNQLQTMVNSTHHQAAKQLGNDLIVSATAEDGIIEAIESTKHKFVIGVQWHPEYLNDNGVDLELFKEFVKV
SK
>Mature_242_residues
MYKKPIIGVTPDLAQNCEKYTYAAFPWYALRRNYTDAIIAAGGVPLLLPYQSDTINQLMELVDGVVMPGGDEDIHPKFYE
PEYAEDIVVSNEERDNFEILVLKKALERDIPVLGICRGMQLLNVIFKGTLIKHIPDYIETVINHTQPSPKNIVSHAINIE
ANTKLAKIANNQLQTMVNSTHHQAAKQLGNDLIVSATAEDGIIEAIESTKHKFVIGVQWHPEYLNDNGVDLELFKEFVKV
SK

Specific function: Unknown

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RPE1 insert domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=226, Percent_Identity=30.9734513274336, Blast_Score=116, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697
- InterPro:   IPR005728 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: NA

Molecular weight: Translated: 27184; Mature: 27184

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKKPIIGVTPDLAQNCEKYTYAAFPWYALRRNYTDAIIAAGGVPLLLPYQSDTINQLME
CCCCCCCCCCHHHHHHHHHCEECCCCHHHHHCCCCHHEEECCCCEEEECCCCHHHHHHHH
LVDGVVMPGGDEDIHPKFYEPEYAEDIVVSNEERDNFEILVLKKALERDIPVLGICRGMQ
HHCCEECCCCCCCCCCCCCCCCHHHHHEECCCCCCCEEEEEEEHHHHCCCCHHHHHHHHH
LLNVIFKGTLIKHIPDYIETVINHTQPSPKNIVSHAINIEANTKLAKIANNQLQTMVNST
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
HHQAAKQLGNDLIVSATAEDGIIEAIESTKHKFVIGVQWHPEYLNDNGVDLELFKEFVKV
HHHHHHHCCCCEEEEECCCCHHHHHHHCCCCEEEEEEEECHHHCCCCCCCHHHHHHHHHH
SK
CC
>Mature Secondary Structure
MYKKPIIGVTPDLAQNCEKYTYAAFPWYALRRNYTDAIIAAGGVPLLLPYQSDTINQLME
CCCCCCCCCCHHHHHHHHHCEECCCCHHHHHCCCCHHEEECCCCEEEECCCCHHHHHHHH
LVDGVVMPGGDEDIHPKFYEPEYAEDIVVSNEERDNFEILVLKKALERDIPVLGICRGMQ
HHCCEECCCCCCCCCCCCCCCCHHHHHEECCCCCCCEEEEEEEHHHHCCCCHHHHHHHHH
LLNVIFKGTLIKHIPDYIETVINHTQPSPKNIVSHAINIEANTKLAKIANNQLQTMVNST
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
HHQAAKQLGNDLIVSATAEDGIIEAIESTKHKFVIGVQWHPEYLNDNGVDLELFKEFVKV
HHHHHHHCCCCEEEEECCCCHHHHHHHCCCCEEEEEEEECHHHCCCCCCCHHHHHHHHHH
SK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893; 11030655 [H]