Click here to switch to the map view.

The map label for this gene is ispZ

Identifier: 15892462

GI number: 15892462

Start: 530114

End: 530656

Strand: Reverse

Name: ispZ

Synonym: RC0539

Alternate gene names: 15892462

Gene position: 530656-530114 (Counterclockwise)

Preceding gene: 15892463

Following gene: 15892461

Centisome position: 41.82

GC content: 29.47

Gene sequence:

>543_bases
ATGTTAAAACTTTTATCAGAAATTGGTCCGGTAATAGCATTTTTTGCAGGCTTTTTTTATGGAGGCGGTATACAACACGC
TACTCTTTATATGCTTATTACCTCTGTTATTTGTATTACCCTTTGTTATGTTATAGATAAGAAAGTATCCAAGCTTTCTA
TTATTTCTACGACTGTTTTATTAGTTTCGGGAAGCATTACTTTAATTAGCGGCGATTCAATGTATATAAAAATCAAACCT
ACTATATTATATGTTATTTTTGGAATAATATTTCTCATGAGCGGTATAAGAAAAAATCCTTTTATCAAATATGCTTTAGA
GAGTATAGTACGTCTTAAAGAAGAAAGTTGGATAACCTTAAGCTATAGAACAGCGGCTTTTTTCTTTTTTATGGCTGTAG
TTAATGAAGTAGTTTGGCGTAATTGCTCAGATGAAACATGGGTAAAATTCAAAGTATTCGGTGTAATACCTATTACTTTT
ATATTTATTTTACTGCAATTACCTCTTTTATTAAAGAATAAATTACCGGATAGTAAGATATGA

Upstream 100 bases:

>100_bases
TTTTCATACAAATAAAATTAAGATATTCCAAAAATAACTTAATATCAGTACAAAAAAATGAATCAAATTAATTTTATCAA
AGAGAACAATTAAATTAAAT

Downstream 100 bases:

>100_bases
TATATAATACCTTACTATTTTTACTTTATGTCATTACCGCGTAGGTGTTGTTGCATGGACCGGTAAAATCCACTGTGTCA
TCCCGCGACTTGATCGTGGG

Product: intracellular septation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MLKLLSEIGPVIAFFAGFFYGGGIQHATLYMLITSVICITLCYVIDKKVSKLSIISTTVLLVSGSITLISGDSMYIKIKP
TILYVIFGIIFLMSGIRKNPFIKYALESIVRLKEESWITLSYRTAAFFFFMAVVNEVVWRNCSDETWVKFKVFGVIPITF
IFILLQLPLLLKNKLPDSKI

Sequences:

>Translated_180_residues
MLKLLSEIGPVIAFFAGFFYGGGIQHATLYMLITSVICITLCYVIDKKVSKLSIISTTVLLVSGSITLISGDSMYIKIKP
TILYVIFGIIFLMSGIRKNPFIKYALESIVRLKEESWITLSYRTAAFFFFMAVVNEVVWRNCSDETWVKFKVFGVIPITF
IFILLQLPLLLKNKLPDSKI
>Mature_180_residues
MLKLLSEIGPVIAFFAGFFYGGGIQHATLYMLITSVICITLCYVIDKKVSKLSIISTTVLLVSGSITLISGDSMYIKIKP
TILYVIFGIIFLMSGIRKNPFIKYALESIVRLKEESWITLSYRTAAFFFFMAVVNEVVWRNCSDETWVKFKVFGVIPITF
IFILLQLPLLLKNKLPDSKI

Specific function: Involved in cell division; probably involved in intracellular septation

COG id: COG2917

COG function: function code D; Intracellular septation protein A

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ispZ family

Homologues:

Organism=Escherichia coli, GI1787507, Length=165, Percent_Identity=29.6969696969697, Blast_Score=70, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ISPZ_RICAE (C3PNB2)

Other databases:

- EMBL:   CP001612
- RefSeq:   YP_002845165.1
- GeneID:   7815567
- GenomeReviews:   CP001612_GR
- KEGG:   raf:RAF_ORF0501
- OMA:   HDETFIK
- ProtClustDB:   PRK00259
- HAMAP:   MF_00189
- InterPro:   IPR006008
- TIGRFAMs:   TIGR00997

Pfam domain/function: PF04279 IspA

EC number: NA

Molecular weight: Translated: 20384; Mature: 20384

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xce21af8)-; HASH(0xafb87d0)-; HASH(0xc46220c)-; HASH(0xc916d08)-; HASH(0xceb7ca4)-; HASH(0xce8eb30)-;

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLLSEIGPVIAFFAGFFYGGGIQHATLYMLITSVICITLCYVIDKKVSKLSIISTTVL
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVSGSITLISGDSMYIKIKPTILYVIFGIIFLMSGIRKNPFIKYALESIVRLKEESWITL
HHCCCEEEEECCEEEEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEE
SYRTAAFFFFMAVVNEVVWRNCSDETWVKFKVFGVIPITFIFILLQLPLLLKNKLPDSKI
EHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCH
>Mature Secondary Structure
MLKLLSEIGPVIAFFAGFFYGGGIQHATLYMLITSVICITLCYVIDKKVSKLSIISTTVL
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVSGSITLISGDSMYIKIKPTILYVIFGIIFLMSGIRKNPFIKYALESIVRLKEESWITL
HHCCCEEEEECCEEEEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEE
SYRTAAFFFFMAVVNEVVWRNCSDETWVKFKVFGVIPITFIFILLQLPLLLKNKLPDSKI
EHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA