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The map label for this gene is qmcA [H]

Identifier: 15892375

GI number: 15892375

Start: 447148

End: 448086

Strand: Reverse

Name: qmcA [H]

Synonym: RC0452

Alternate gene names: 15892375

Gene position: 448086-447148 (Counterclockwise)

Preceding gene: 15892376

Following gene: 15892374

Centisome position: 35.32

GC content: 36.63

Gene sequence:

>939_bases
ATGGAATATGCATTATTAATTTTCAGTATTATAGCGATTTTAGTTATAATACAAATGGTTAAAGTTGTACCGCAACAACA
AGCATGGGTAGTAGAAAAACTTGGAAAATTCGATAAGGTACTGCAGCCTGGCTTAAATTTACTCATCCCTGTTATTCAGA
GAGTAGCATACAAACATACTTTAAAAGAAGAAGCAATAGACGTTACCGCTCAAACAGCTATTTCAAACGATAACGTAACA
TTATCTATAGACGGTGTTTTATATGTTAAGATCATTGATCCAATGGCAGCATCTTATGGTGTTAATAATCCTTACTATGC
CATAACACAGCTTGCTCAAACTACTATGCGTTCGGAAATCGGTAAACTCCCTTTAGATAGAACTTTTGAAGAGCGCGAAA
CTTTAAACGTAGCAATTGTAGCAGCTATTAATCAGGCTGCTATAAATTGGGGCATACAATGTATGCGTTATGAAATTAAA
GATATTCAACCTCCGCAAACTATACTTAAAGCTATGGAATTGCAGGTAGCGGCAGAGCGTCAAAAAAGAGCTCAAATTCT
AGAGTCGGAAGGTAATAGACAAGCAAAAATTAATCATGCAGAAGGTGAAAAAGCACAAATCGTACTGAATTCAGAAGCTT
CTTATACAGATCAAGTTAACAGGGCAAAAGGTGAAGCTGAAGCAATAGGCTTAGTCGCTACCGCTACGGCAAATAGTATT
GAGATTGTCGCAACTGCCGTACAAAAAACGGGAGGAAGTGATGCAGTAGCTCTTAAAATAGCCGAGCAATATATTAGTGC
GTTCGGTAATTTGGCTAAAGATACCAACACCGTAATTTTACCTGCAAATCTTTCAGAACCGAGTAGTTTTATAACCGAAG
CATTAACTATATTTAACCAATTAAAAGCTTCTTCTTCGGGAACGAAAATAGATAAGTAG

Upstream 100 bases:

>100_bases
TTAATGATAAAAAAAATATATAATTAAGTACCATTTAACTTAAATCCTTTTTTTATAATTAAAAATAATATAGAGTGGAA
ATAAAAAAAGGTATTGAATT

Downstream 100 bases:

>100_bases
CAATTTATAACGATTTATTATTGTAATAATAATTAGTTTTATATATCATATCAGATTATTAATTAATAAAAGGTTATGAA
TATGTCAGTATTTGTCGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MEYALLIFSIIAILVIIQMVKVVPQQQAWVVEKLGKFDKVLQPGLNLLIPVIQRVAYKHTLKEEAIDVTAQTAISNDNVT
LSIDGVLYVKIIDPMAASYGVNNPYYAITQLAQTTMRSEIGKLPLDRTFEERETLNVAIVAAINQAAINWGIQCMRYEIK
DIQPPQTILKAMELQVAAERQKRAQILESEGNRQAKINHAEGEKAQIVLNSEASYTDQVNRAKGEAEAIGLVATATANSI
EIVATAVQKTGGSDAVALKIAEQYISAFGNLAKDTNTVILPANLSEPSSFITEALTIFNQLKASSSGTKIDK

Sequences:

>Translated_312_residues
MEYALLIFSIIAILVIIQMVKVVPQQQAWVVEKLGKFDKVLQPGLNLLIPVIQRVAYKHTLKEEAIDVTAQTAISNDNVT
LSIDGVLYVKIIDPMAASYGVNNPYYAITQLAQTTMRSEIGKLPLDRTFEERETLNVAIVAAINQAAINWGIQCMRYEIK
DIQPPQTILKAMELQVAAERQKRAQILESEGNRQAKINHAEGEKAQIVLNSEASYTDQVNRAKGEAEAIGLVATATANSI
EIVATAVQKTGGSDAVALKIAEQYISAFGNLAKDTNTVILPANLSEPSSFITEALTIFNQLKASSSGTKIDK
>Mature_312_residues
MEYALLIFSIIAILVIIQMVKVVPQQQAWVVEKLGKFDKVLQPGLNLLIPVIQRVAYKHTLKEEAIDVTAQTAISNDNVT
LSIDGVLYVKIIDPMAASYGVNNPYYAITQLAQTTMRSEIGKLPLDRTFEERETLNVAIVAAINQAAINWGIQCMRYEIK
DIQPPQTILKAMELQVAAERQKRAQILESEGNRQAKINHAEGEKAQIVLNSEASYTDQVNRAKGEAEAIGLVATATANSI
EIVATAVQKTGGSDAVALKIAEQYISAFGNLAKDTNTVILPANLSEPSSFITEALTIFNQLKASSSGTKIDK

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=291, Percent_Identity=54.639175257732, Blast_Score=323, Evalue=1e-88,
Organism=Homo sapiens, GI221316744, Length=199, Percent_Identity=32.6633165829146, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI21686995, Length=199, Percent_Identity=32.6633165829146, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI38016911, Length=215, Percent_Identity=27.906976744186, Blast_Score=78, Evalue=1e-14,
Organism=Escherichia coli, GI1786697, Length=279, Percent_Identity=36.2007168458781, Blast_Score=186, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI32564147, Length=286, Percent_Identity=55.9440559440559, Blast_Score=340, Evalue=5e-94,
Organism=Caenorhabditis elegans, GI17569493, Length=192, Percent_Identity=32.2916666666667, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI193209764, Length=192, Percent_Identity=32.2916666666667, Blast_Score=101, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17569497, Length=198, Percent_Identity=29.2929292929293, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI193210507, Length=200, Percent_Identity=31.5, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17570161, Length=200, Percent_Identity=31.5, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71989948, Length=155, Percent_Identity=30.9677419354839, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71989955, Length=155, Percent_Identity=30.9677419354839, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI32566490, Length=212, Percent_Identity=28.7735849056604, Blast_Score=81, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17569499, Length=218, Percent_Identity=28.8990825688073, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71987612, Length=209, Percent_Identity=28.2296650717703, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI25153583, Length=212, Percent_Identity=27.8301886792453, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71987621, Length=212, Percent_Identity=27.8301886792453, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17570459, Length=208, Percent_Identity=27.8846153846154, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI45550506, Length=290, Percent_Identity=54.4827586206897, Blast_Score=322, Evalue=2e-88,
Organism=Drosophila melanogaster, GI18860517, Length=194, Percent_Identity=30.4123711340206, Blast_Score=85, Evalue=7e-17,
Organism=Drosophila melanogaster, GI62484448, Length=218, Percent_Identity=28.8990825688073, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI62484274, Length=218, Percent_Identity=28.8990825688073, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI281365664, Length=218, Percent_Identity=28.8990825688073, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI45556022, Length=213, Percent_Identity=28.6384976525822, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24657857, Length=218, Percent_Identity=28.8990825688073, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI28573263, Length=201, Percent_Identity=28.8557213930348, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI281361633, Length=189, Percent_Identity=25.9259259259259, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI281361631, Length=189, Percent_Identity=25.9259259259259, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI21356845, Length=204, Percent_Identity=25, Blast_Score=79, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 34026; Mature: 34026

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYALLIFSIIAILVIIQMVKVVPQQQAWVVEKLGKFDKVLQPGLNLLIPVIQRVAYKHT
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LKEEAIDVTAQTAISNDNVTLSIDGVLYVKIIDPMAASYGVNNPYYAITQLAQTTMRSEI
HHHHHHHHHHHHEECCCCEEEEECCEEEEEEECHHHHHCCCCCCHHHHHHHHHHHHHHHH
GKLPLDRTFEERETLNVAIVAAINQAAINWGIQCMRYEIKDIQPPQTILKAMELQVAAER
CCCCCCCCHHHHHHHCEEEEEHHHHHHHHHHHHHHEEHHCCCCCHHHHHHHHHHHHHHHH
QKRAQILESEGNRQAKINHAEGEKAQIVLNSEASYTDQVNRAKGEAEAIGLVATATANSI
HHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHCCCCHHHEEEEEECCCCCH
EIVATAVQKTGGSDAVALKIAEQYISAFGNLAKDTNTVILPANLSEPSSFITEALTIFNQ
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH
LKASSSGTKIDK
HHCCCCCCCCCC
>Mature Secondary Structure
MEYALLIFSIIAILVIIQMVKVVPQQQAWVVEKLGKFDKVLQPGLNLLIPVIQRVAYKHT
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LKEEAIDVTAQTAISNDNVTLSIDGVLYVKIIDPMAASYGVNNPYYAITQLAQTTMRSEI
HHHHHHHHHHHHEECCCCEEEEECCEEEEEEECHHHHHCCCCCCHHHHHHHHHHHHHHHH
GKLPLDRTFEERETLNVAIVAAINQAAINWGIQCMRYEIKDIQPPQTILKAMELQVAAER
CCCCCCCCHHHHHHHCEEEEEHHHHHHHHHHHHHHEEHHCCCCCHHHHHHHHHHHHHHHH
QKRAQILESEGNRQAKINHAEGEKAQIVLNSEASYTDQVNRAKGEAEAIGLVATATANSI
HHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHCCCCHHHEEEEEECCCCCH
EIVATAVQKTGGSDAVALKIAEQYISAFGNLAKDTNTVILPANLSEPSSFITEALTIFNQ
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH
LKASSSGTKIDK
HHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]