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The map label for this gene is smf [H]

Identifier: 15892373

GI number: 15892373

Start: 445193

End: 445528

Strand: Reverse

Name: smf [H]

Synonym: RC0450

Alternate gene names: 15892373

Gene position: 445528-445193 (Counterclockwise)

Preceding gene: 15892374

Following gene: 15892372

Centisome position: 35.12

GC content: 34.82

Gene sequence:

>336_bases
GTGGTAGTAGAAGCAAGCTTAAAATCCGGTTCATTAATAACTGCAAAATTTGCACTTGAACAAAATAGGGCAATATTTGC
CGTTCCCGGCTTTCCTTTAGATCCAAAATGTCAAGGTACAAATAAATTGATTAGAGAGGGAGCATATTTAGTGGAATCAG
TAGACGATATTGTAGCTAATTTACCGCAATATGAAGAATTTATGAAAAAAGATGATGGATTATTTAAGGATTTTGTTGAG
CTAGGAACAGTAAATACGAGATATGTTAAAGAACCGTCACAAAAGGAGCGTACTGCTTGCTATATTGGAATTATTATCGG
CAGTACCCATAAATAG

Upstream 100 bases:

>100_bases
GAAGAAGGTTTAATATTATGAGTTACCTATCGGCTTTACCCCGCTTGGAAAACATTTTCCACAGCGTAACAGGATAATAT
CGGGACTAGCCTTAGGAGTA

Downstream 100 bases:

>100_bases
ACTTGGAATATTTACAAAAAGAAATAGAATTACCGCTTCCTATCATATATACGGTAATATTAGAATTAGAATTCGCCGGG
ACAGTAATGCGTCACGCCGG

Product: putative DNA processing protein Smf

Products: NA

Alternate protein names: DNA-processing chain A [H]

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MVVEASLKSGSLITAKFALEQNRAIFAVPGFPLDPKCQGTNKLIREGAYLVESVDDIVANLPQYEEFMKKDDGLFKDFVE
LGTVNTRYVKEPSQKERTACYIGIIIGSTHK

Sequences:

>Translated_111_residues
MVVEASLKSGSLITAKFALEQNRAIFAVPGFPLDPKCQGTNKLIREGAYLVESVDDIVANLPQYEEFMKKDDGLFKDFVE
LGTVNTRYVKEPSQKERTACYIGIIIGSTHK
>Mature_111_residues
MVVEASLKSGSLITAKFALEQNRAIFAVPGFPLDPKCQGTNKLIREGAYLVESVDDIVANLPQYEEFMKKDDGLFKDFVE
LGTVNTRYVKEPSQKERTACYIGIIIGSTHK

Specific function: Essential for efficient chromosomal DNA transformation but not required for plasmid transformation [H]

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=61, Percent_Identity=50.8196721311475, Blast_Score=65, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 12343; Mature: 12343

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVEASLKSGSLITAKFALEQNRAIFAVPGFPLDPKCQGTNKLIREGAYLVESVDDIVAN
CEEECCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHC
LPQYEEFMKKDDGLFKDFVELGTVNTRYVKEPSQKERTACYIGIIIGSTHK
CCHHHHHHHHCCCHHHHHHHHCCCCCEECCCCCCCCCCEEEEEEEECCCCC
>Mature Secondary Structure
MVVEASLKSGSLITAKFALEQNRAIFAVPGFPLDPKCQGTNKLIREGAYLVESVDDIVAN
CEEECCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHC
LPQYEEFMKKDDGLFKDFVELGTVNTRYVKEPSQKERTACYIGIIIGSTHK
CCHHHHHHHHCCCHHHHHHHHCCCCCEECCCCCCCCCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7768823; 7542800 [H]