| Definition | Rickettsia conorii str. Malish 7, complete genome. |
|---|---|
| Accession | NC_003103 |
| Length | 1,268,755 |
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The map label for this gene is 15892076
Identifier: 15892076
GI number: 15892076
Start: 153552
End: 153788
Strand: Reverse
Name: 15892076
Synonym: RC0153
Alternate gene names: NA
Gene position: 153788-153552 (Counterclockwise)
Preceding gene: 15892084
Following gene: 15892058
Centisome position: 12.12
GC content: 30.38
Gene sequence:
>237_bases ATGTCAGAAGTAGTAGTAAAAGAACAATTAGAGCAATATATAAGCAAAATAGAAAGATTAGAACAAGAAAAAGCTGATTT ATCTCAAGAAGTAAAAGATATCTTCCAAGATGCTTCTTCACATGGATTTGATGTTAAAGCTATGAAATCTATATTGAAAC TAAAGAAATTAGATAAAGATAAACTTGCCGAGCAGGACGCTATGCTTGAGCTTTATAGAGATACTTTAGGGATTTGA
Upstream 100 bases:
>100_bases GTAAAAGTCTTAAAGGATAAATTTGCATTATTATATATTTTGTTGAATAAGGATTATATTTGTATTATATAGTAAATTCA AAAAGGTTAAATGATTTTTT
Downstream 100 bases:
>100_bases GGCATACGTCATTGCGAGGAAATTACGAAGTAATTGACGAAGCAATCTAAGGAGTTTGTTATTATTTCATGAGATTGCCA TGCAGCCTACGGCTGCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MSEVVVKEQLEQYISKIERLEQEKADLSQEVKDIFQDASSHGFDVKAMKSILKLKKLDKDKLAEQDAMLELYRDTLGI
Sequences:
>Translated_78_residues MSEVVVKEQLEQYISKIERLEQEKADLSQEVKDIFQDASSHGFDVKAMKSILKLKKLDKDKLAEQDAMLELYRDTLGI >Mature_77_residues SEVVVKEQLEQYISKIERLEQEKADLSQEVKDIFQDASSHGFDVKAMKSILKLKKLDKDKLAEQDAMLELYRDTLGI
Specific function: Unknown
COG id: COG3750
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0335 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018753 [H]
Pfam domain/function: PF10073 DUF2312 [H]
EC number: NA
Molecular weight: Translated: 9030; Mature: 8898
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVVVKEQLEQYISKIERLEQEKADLSQEVKDIFQDASSHGFDVKAMKSILKLKKLDKD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHH KLAEQDAMLELYRDTLGI HHHHHHHHHHHHHHHHCC >Mature Secondary Structure SEVVVKEQLEQYISKIERLEQEKADLSQEVKDIFQDASSHGFDVKAMKSILKLKKLDKD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHH KLAEQDAMLELYRDTLGI HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA