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The map label for this gene is 15891968

Identifier: 15891968

GI number: 15891968

Start: 42377

End: 42703

Strand: Reverse

Name: 15891968

Synonym: RC0045

Alternate gene names: NA

Gene position: 42703-42377 (Counterclockwise)

Preceding gene: 15891971

Following gene: 15891966

Centisome position: 3.37

GC content: 33.33

Gene sequence:

>327_bases
TTGAACTGCCCTTTGAGTTTGCAGATTGTCAACGTTAGTTATATTGTTAATACTAACTCTTGTAGTTGGATTGCCTTCAA
TAATAGTAAATACCCCATTAAAACCATAAAGATTAATATCATTAATATTAATATTTTGGGCAAAATTAACCATATGGTTA
TTTTCTGCGATAATAATATTGTTATTATCTTGTGGAAGATAATGGTTGTGATTATATCTTCAATCATTCATCGTACCTAT
ATTAGAAGATGGATTTCCCGCCGGAATAATATCCGCCGCAAAGCCTCCCATGCTTGCAAGCAGCCCAATAATACTACTGG
TTGCTAG

Upstream 100 bases:

>100_bases
TGGTTAGCTCAGCACCTGTTCCATTACCGCTTATAAGCTTTAGCTTTGCTTTTGCATTATTATTATTGGCGCCATATGCA
AGAGGTGCTCCTAAAGCATT

Downstream 100 bases:

>100_bases
TAAAAGTTTATTAAAAAAAATTTTGTTCTTATTAGTTATAATTTCCCCTATAACTTATTGCTTTTAATGATTTTACCACT
TAACTTATCGGTCATTATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MNCPLSLQIVNVSYIVNTNSCSWIAFNNSKYPIKTIKINIININILGKINHMVIFCDNNIVIILWKIMVVIISSIIHRTY
IRRWISRRNNIRRKASHACKQPNNTTGC

Sequences:

>Translated_108_residues
MNCPLSLQIVNVSYIVNTNSCSWIAFNNSKYPIKTIKINIININILGKINHMVIFCDNNIVIILWKIMVVIISSIIHRTY
IRRWISRRNNIRRKASHACKQPNNTTGC
>Mature_108_residues
MNCPLSLQIVNVSYIVNTNSCSWIAFNNSKYPIKTIKINIININILGKINHMVIFCDNNIVIILWKIMVVIISSIIHRTY
IRRWISRRNNIRRKASHACKQPNNTTGC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y045_RICCN (Q92JM2)

Other databases:

- EMBL:   AE006914
- PIR:   E97705
- RefSeq:   NP_359682.1
- GeneID:   928620
- GenomeReviews:   AE006914_GR
- KEGG:   rco:RC0045
- NMPDR:   fig|272944.1.peg.45
- OMA:   KASHACK
- ProtClustDB:   CLSK881884
- BioCyc:   RCON272944:RC0045-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12526; Mature: 12526

Theoretical pI: Translated: 10.97; Mature: 10.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xaebf184)-;

Cys/Met content:

4.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNCPLSLQIVNVSYIVNTNSCSWIAFNNSKYPIKTIKINIININILGKINHMVIFCDNNI
CCCCEEEEEEEEEEEEECCCEEEEEECCCCCCEEEEEEEEEEEEEEEEECEEEEEECCCE
VIILWKIMVVIISSIIHRTYIRRWISRRNNIRRKASHACKQPNNTTGC
EEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCH
>Mature Secondary Structure
MNCPLSLQIVNVSYIVNTNSCSWIAFNNSKYPIKTIKINIININILGKINHMVIFCDNNI
CCCCEEEEEEEEEEEEECCCEEEEEECCCCCCEEEEEEEEEEEEEEEEECEEEEEECCCE
VIILWKIMVVIISSIIHRTYIRRWISRRNNIRRKASHACKQPNNTTGC
EEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11557893