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The map label for this gene is 15891962

Identifier: 15891962

GI number: 15891962

Start: 36524

End: 37192

Strand: Reverse

Name: 15891962

Synonym: RC0039

Alternate gene names: NA

Gene position: 37192-36524 (Counterclockwise)

Preceding gene: 15891963

Following gene: 15891961

Centisome position: 2.93

GC content: 30.49

Gene sequence:

>669_bases
ATGACAAATAATCAATTTTCTGAAGATACCAAAAAAATTGCTGATCAAATAAAAGATGCATTAATGGGTATTAGTGACGA
TCTTGTACTTGAAAGTAAAGAGGTAGAGGAAATTTTTGAAGAATTAAGCCAAAATGAAGAATTTGAGTATGAGATGGAAC
GAATGCTTTCTATCTTAAATGAACAAACTATGGATTTAACTCAACTGCAAAGTCGGATTATCTTATTAATCCGTAAGTAT
TTAGGTAAAACTAAAAACTTAAAGCTTAAAATGCTTAAAATGGATGAGAAGCTCATTAACAAGAATGTTGCCGAAGTCAG
TAATTATTTAATGCATCAGCATTCTAAAATAGTTAGAGATGCTAATAAAAACCTTACAAACCCAAAAGACAAATTACAAG
GTTTAACCAAACAAGCTAGAATAGACTTAAAACGTTTATTAAAAAGCTTTGCCGTTTACCAAATTTATATGTTTATGAAC
CCAAAAAGAATAGCAGGCGAAACGAAGCTAATGAACTTCGCCTATAATATGATCAAAGGGGGCATGAAACTCGCTAAAAA
ATATGAAGGCGGCAAGGAACAAGAAATTAAATCATATTCACCTAGACTTATTAAAAAACTTAAAAAAGCTCATGTCGGCT
TTAAAAAAAGTGGCGGTATATCAATTTAA

Upstream 100 bases:

>100_bases
CTCAATGAGAAAAATTTAATATCTCTTAATACAATTTTTATAGACAAGCAGAAATGTGGTGCTAGTATAAAAATAGCTAT
ATTTAATGATGAATTAGATT

Downstream 100 bases:

>100_bases
CTATTGTATCTTTTTATAAATTTTTATAAAGAGCTTATACTAAACTAACATTAATATTATGATAGGTATCAAGCTTTCAA
CTTAAATTATGTAAACTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MTNNQFSEDTKKIADQIKDALMGISDDLVLESKEVEEIFEELSQNEEFEYEMERMLSILNEQTMDLTQLQSRIILLIRKY
LGKTKNLKLKMLKMDEKLINKNVAEVSNYLMHQHSKIVRDANKNLTNPKDKLQGLTKQARIDLKRLLKSFAVYQIYMFMN
PKRIAGETKLMNFAYNMIKGGMKLAKKYEGGKEQEIKSYSPRLIKKLKKAHVGFKKSGGISI

Sequences:

>Translated_222_residues
MTNNQFSEDTKKIADQIKDALMGISDDLVLESKEVEEIFEELSQNEEFEYEMERMLSILNEQTMDLTQLQSRIILLIRKY
LGKTKNLKLKMLKMDEKLINKNVAEVSNYLMHQHSKIVRDANKNLTNPKDKLQGLTKQARIDLKRLLKSFAVYQIYMFMN
PKRIAGETKLMNFAYNMIKGGMKLAKKYEGGKEQEIKSYSPRLIKKLKKAHVGFKKSGGISI
>Mature_221_residues
TNNQFSEDTKKIADQIKDALMGISDDLVLESKEVEEIFEELSQNEEFEYEMERMLSILNEQTMDLTQLQSRIILLIRKYL
GKTKNLKLKMLKMDEKLINKNVAEVSNYLMHQHSKIVRDANKNLTNPKDKLQGLTKQARIDLKRLLKSFAVYQIYMFMNP
KRIAGETKLMNFAYNMIKGGMKLAKKYEGGKEQEIKSYSPRLIKKLKKAHVGFKKSGGISI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y039_RICCN (Q92JM8)

Other databases:

- EMBL:   AE006914
- PIR:   G97704
- RefSeq:   NP_359676.1
- GeneID:   928626
- GenomeReviews:   AE006914_GR
- KEGG:   rco:RC0039
- NMPDR:   fig|272944.1.peg.39
- OMA:   KAHAGFK
- ProtClustDB:   CLSK870710
- BioCyc:   RCON272944:RC0039-MONOMER
- InterPro:   IPR020171
- ProDom:   PD210227

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25805; Mature: 25674

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNNQFSEDTKKIADQIKDALMGISDDLVLESKEVEEIFEELSQNEEFEYEMERMLSILN
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
EQTMDLTQLQSRIILLIRKYLGKTKNLKLKMLKMDEKLINKNVAEVSNYLMHQHSKIVRD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ANKNLTNPKDKLQGLTKQARIDLKRLLKSFAVYQIYMFMNPKRIAGETKLMNFAYNMIKG
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
GMKLAKKYEGGKEQEIKSYSPRLIKKLKKAHVGFKKSGGISI
HHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TNNQFSEDTKKIADQIKDALMGISDDLVLESKEVEEIFEELSQNEEFEYEMERMLSILN
CCCCHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
EQTMDLTQLQSRIILLIRKYLGKTKNLKLKMLKMDEKLINKNVAEVSNYLMHQHSKIVRD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ANKNLTNPKDKLQGLTKQARIDLKRLLKSFAVYQIYMFMNPKRIAGETKLMNFAYNMIKG
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
GMKLAKKYEGGKEQEIKSYSPRLIKKLKKAHVGFKKSGGISI
HHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893