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The map label for this gene is ycaI [C]

Identifier: 15891940

GI number: 15891940

Start: 15687

End: 16421

Strand: Reverse

Name: ycaI [C]

Synonym: RC0017

Alternate gene names: 15891940

Gene position: 16421-15687 (Counterclockwise)

Preceding gene: 15891941

Following gene: 15891939

Centisome position: 1.29

GC content: 32.93

Gene sequence:

>735_bases
ATGCAGGATATGAGGCAAAACGGTATATCACACGTGCTTTGTGTTTCAGGATTGCATCTATCTTTAGTTGTGATGATTAT
TTTCCTTACTACAAGGTTTTTATTAAATCTTTCAAATTATTTGGCATATAATTTCAATATAAAATTAATCTCTGCTTATT
GTTCGCTAATAGGAAGCTTTGGTTATTTAGAACTAAGCGGTATGCAAGCAGCGACTAGAGCTTTTATTACTGCTGCAATT
TTTATTTACGGTATTATATTTATCGGACGCTCTTGCTTTCCCCTTCATTCACTTGCAATTGCGGCTTTTATAATATTATC
GTTAAATCCCGAATATATTTTTCATCCAAGTTTCCAATTATCTTTTATCGCCGTATTATCGCTTGTTGCCGGTTATGAAT
TTTACTTAAAGAATTCATGGTTACTTGGAGAAAAGAAAGGCATTTTTGGAGCAGTAAAATTTTATACAGCCTCAAATATT
TATTCAAGCTTCTTAGCAAGCATCATAACGGCACCTGTAGTAATTAATCAATTCTTTATATTTGCTACTTACTCAGTACC
AGCTAACCTCATTGTCGTTCCAATAACGTTATTTTTTCTTATGCCTCTTGCTTTGTTATCTCTGCCTTTTACCATGATCG
GGTTTGATAACTATATCCTAAAGCTTATGGGATTCTTTATTGATATAATAATAAAATCAGCCGCCTATTTTAATAGTTTA
CCGGCTGCTGTATAG

Upstream 100 bases:

>100_bases
GAGTGCGTTCCTATATTTATAATAATTTAATAGAAAAGATAAAGGGACTTTTGCAGCTGCAATATTACTTGGCAAGACAA
AAGGTTTAAACAGGCAAATA

Downstream 100 bases:

>100_bases
TATTTCAGTTATATTACAATTTCAGCATATTACTCTTTTTTATTCGGCTTTTTTGGCTTTGTATATGGAAAACTGCTTGG
CGTTTGCTTGGTCTTGCAAT

Product: putative competence locus E protein 3

Products: NA

Alternate protein names: Competence Protein; ComEC/Rec2 Family Protein; DNA Uptake Protein; ComEC/Rec2-Like Protein; DNA Translocation Competence Protein ComA; DNA Uptake Protein ComEC; ComEc/Rec2-Like Protein; Transmembrane DNA Uptake Competence-Related Protein; DNA Internalization-Related Competence; Competence Locus E; DNA Translocation Competence Protein; DNA Translocation Competence

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MQDMRQNGISHVLCVSGLHLSLVVMIIFLTTRFLLNLSNYLAYNFNIKLISAYCSLIGSFGYLELSGMQAATRAFITAAI
FIYGIIFIGRSCFPLHSLAIAAFIILSLNPEYIFHPSFQLSFIAVLSLVAGYEFYLKNSWLLGEKKGIFGAVKFYTASNI
YSSFLASIITAPVVINQFFIFATYSVPANLIVVPITLFFLMPLALLSLPFTMIGFDNYILKLMGFFIDIIIKSAAYFNSL
PAAV

Sequences:

>Translated_244_residues
MQDMRQNGISHVLCVSGLHLSLVVMIIFLTTRFLLNLSNYLAYNFNIKLISAYCSLIGSFGYLELSGMQAATRAFITAAI
FIYGIIFIGRSCFPLHSLAIAAFIILSLNPEYIFHPSFQLSFIAVLSLVAGYEFYLKNSWLLGEKKGIFGAVKFYTASNI
YSSFLASIITAPVVINQFFIFATYSVPANLIVVPITLFFLMPLALLSLPFTMIGFDNYILKLMGFFIDIIIKSAAYFNSL
PAAV
>Mature_244_residues
MQDMRQNGISHVLCVSGLHLSLVVMIIFLTTRFLLNLSNYLAYNFNIKLISAYCSLIGSFGYLELSGMQAATRAFITAAI
FIYGIIFIGRSCFPLHSLAIAAFIILSLNPEYIFHPSFQLSFIAVLSLVAGYEFYLKNSWLLGEKKGIFGAVKFYTASNI
YSSFLASIITAPVVINQFFIFATYSVPANLIVVPITLFFLMPLALLSLPFTMIGFDNYILKLMGFFIDIIIKSAAYFNSL
PAAV

Specific function: Unknown

COG id: COG0658

COG function: function code R; Predicted membrane metal-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27130; Mature: 27130

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDMRQNGISHVLCVSGLHLSLVVMIIFLTTRFLLNLSNYLAYNFNIKLISAYCSLIGSF
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHCCC
GYLELSGMQAATRAFITAAIFIYGIIFIGRSCFPLHSLAIAAFIILSLNPEYIFHPSFQL
CCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEECCCHHH
SFIAVLSLVAGYEFYLKNSWLLGEKKGIFGAVKFYTASNIYSSFLASIITAPVVINQFFI
HHHHHHHHHHCHHHEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FATYSVPANLIVVPITLFFLMPLALLSLPFTMIGFDNYILKLMGFFIDIIIKSAAYFNSL
EEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAAV
CCCC
>Mature Secondary Structure
MQDMRQNGISHVLCVSGLHLSLVVMIIFLTTRFLLNLSNYLAYNFNIKLISAYCSLIGSF
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHCCC
GYLELSGMQAATRAFITAAIFIYGIIFIGRSCFPLHSLAIAAFIILSLNPEYIFHPSFQL
CCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEECCCHHH
SFIAVLSLVAGYEFYLKNSWLLGEKKGIFGAVKFYTASNIYSSFLASIITAPVVINQFFI
HHHHHHHHHHCHHHEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FATYSVPANLIVVPITLFFLMPLALLSLPFTMIGFDNYILKLMGFFIDIIIKSAAYFNSL
EEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAAV
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA