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The map label for this gene is accD [H]

Identifier: 16119960

GI number: 16119960

Start: 161875

End: 162801

Strand: Direct

Name: accD [H]

Synonym: Atu6142

Alternate gene names: 16119960

Gene position: 161875-162801 (Clockwise)

Preceding gene: 16119959

Following gene: 16119961

Centisome position: 75.56

GC content: 56.85

Gene sequence:

>927_bases
ATGATTAGTTTCATCCTTGCACGCCTCGTTCGAGCGATCATTGTCATGATGCTGACCGTGACGTTTGTCTTCATCATTCT
CAGGTTGGGTGGAGATCCAGCTCGGGCCATGTTGGGCGAGAACGCGACGCCAGAGGCGCTGGCAGCATTCCGAACAGCAT
GGGGCCTGGACAGATCCATTCCTGAACAGTTCCTGATCTATCTCGCCAGCGCGCTCAGAGGCGACTTCGGGGTATCGGCA
GCCGACGGTCGTGAGGTATTCACCGTCATCTCCGAACGTATACCCAAGACATTGACGCTGACGATCTCAGCATTCGTGCT
AAGCATACTCGTCGGTATCCCCGCGGGAATCATCGCAGCAGTCCGCCGCGACAGTGCCGCCGACAAATCCGTCATGGCAG
GCGCTGTTCTCGGCTATAGCGTACCAAATTTCTTGCTCGGACTGACGCTCATCTTCGTGTTTGCCGTCTGGTTTCGTGTG
CTGCCGAGCTCGGGAAGTTCCACCTGGCAGCATGCGATCCTGCCCGTTGCGACATTCGGTCTTGTCAATGCGGCTGCGAT
TGCGCGCTTCGCGCGTTCCGCGCTGATCGAAGTTCTGGAACAGCCCTATATCGCAGCGGCTCGCGCCGATGGTATTCCCA
AGTGGGAAGTGGTTATCCGCCACGCGCTCCCGAACGCGGCGATCCCGATGGTGACCATGCTGGGTTTCGTTGCAGCTGGC
TTGCTGGGGGGGTCGGCTATCGTAGAGACCGTATTCGCCTGGCCCGGGCTTGGTAGCGGTTTTGTTCGAGCAATCACGCT
CAGCGATCTCAATGTCGTTCAGGCAATGATCCTTCTCTTCACGGCGTTCATGGTCACGATCAACTTGATCGTCGATGTTC
TCTATGCGGTGCTGAACCCGAAAATCAGGCTTCAAAAAAATGGCTAA

Upstream 100 bases:

>100_bases
GGCCTGCGGGCGGGCAACTGGCAGCGTGCCATAGAGCGGAAGAGTTTCCGAGATCTATAGTCGCGCAGACTGATCCGGCG
CAGATGATGGAGGTGGCGCG

Downstream 100 bases:

>100_bases
TACGACACTCTCATTACCAAAGCGGCAATTCCTGAAATCTGCCCGCCGCATTCCGATCAGTATCTGGCTATGCCTGATCT
GGATTGCGGTTGTCGTCTTC

Product: ABC transporter, membrane spanning protein (agrocinopine)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MISFILARLVRAIIVMMLTVTFVFIILRLGGDPARAMLGENATPEALAAFRTAWGLDRSIPEQFLIYLASALRGDFGVSA
ADGREVFTVISERIPKTLTLTISAFVLSILVGIPAGIIAAVRRDSAADKSVMAGAVLGYSVPNFLLGLTLIFVFAVWFRV
LPSSGSSTWQHAILPVATFGLVNAAAIARFARSALIEVLEQPYIAAARADGIPKWEVVIRHALPNAAIPMVTMLGFVAAG
LLGGSAIVETVFAWPGLGSGFVRAITLSDLNVVQAMILLFTAFMVTINLIVDVLYAVLNPKIRLQKNG

Sequences:

>Translated_308_residues
MISFILARLVRAIIVMMLTVTFVFIILRLGGDPARAMLGENATPEALAAFRTAWGLDRSIPEQFLIYLASALRGDFGVSA
ADGREVFTVISERIPKTLTLTISAFVLSILVGIPAGIIAAVRRDSAADKSVMAGAVLGYSVPNFLLGLTLIFVFAVWFRV
LPSSGSSTWQHAILPVATFGLVNAAAIARFARSALIEVLEQPYIAAARADGIPKWEVVIRHALPNAAIPMVTMLGFVAAG
LLGGSAIVETVFAWPGLGSGFVRAITLSDLNVVQAMILLFTAFMVTINLIVDVLYAVLNPKIRLQKNG
>Mature_308_residues
MISFILARLVRAIIVMMLTVTFVFIILRLGGDPARAMLGENATPEALAAFRTAWGLDRSIPEQFLIYLASALRGDFGVSA
ADGREVFTVISERIPKTLTLTISAFVLSILVGIPAGIIAAVRRDSAADKSVMAGAVLGYSVPNFLLGLTLIFVFAVWFRV
LPSSGSSTWQHAILPVATFGLVNAAAIARFARSALIEVLEQPYIAAARADGIPKWEVVIRHALPNAAIPMVTMLGFVAAG
LLGGSAIVETVFAWPGLGSGFVRAITLSDLNVVQAMILLFTAFMVTINLIVDVLYAVLNPKIRLQKNG

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=306, Percent_Identity=43.4640522875817, Blast_Score=238, Evalue=3e-64,
Organism=Escherichia coli, GI1789888, Length=310, Percent_Identity=38.7096774193548, Blast_Score=199, Evalue=1e-52,
Organism=Escherichia coli, GI1789965, Length=342, Percent_Identity=35.672514619883, Blast_Score=194, Evalue=4e-51,
Organism=Escherichia coli, GI1787497, Length=307, Percent_Identity=34.2019543973941, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI1787761, Length=301, Percent_Identity=35.8803986710963, Blast_Score=154, Evalue=6e-39,
Organism=Escherichia coli, GI1787550, Length=273, Percent_Identity=30.7692307692308, Blast_Score=134, Evalue=8e-33,
Organism=Escherichia coli, GI1788504, Length=287, Percent_Identity=27.5261324041812, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32867; Mature: 32867

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISFILARLVRAIIVMMLTVTFVFIILRLGGDPARAMLGENATPEALAAFRTAWGLDRSI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCC
PEQFLIYLASALRGDFGVSAADGREVFTVISERIPKTLTLTISAFVLSILVGIPAGIIAA
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHH
VRRDSAADKSVMAGAVLGYSVPNFLLGLTLIFVFAVWFRVLPSSGSSTWQHAILPVATFG
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LVNAAAIARFARSALIEVLEQPYIAAARADGIPKWEVVIRHALPNAAIPMVTMLGFVAAG
HHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
LLGGSAIVETVFAWPGLGSGFVRAITLSDLNVVQAMILLFTAFMVTINLIVDVLYAVLNP
HHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KIRLQKNG
CEEEECCC
>Mature Secondary Structure
MISFILARLVRAIIVMMLTVTFVFIILRLGGDPARAMLGENATPEALAAFRTAWGLDRSI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCC
PEQFLIYLASALRGDFGVSAADGREVFTVISERIPKTLTLTISAFVLSILVGIPAGIIAA
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHH
VRRDSAADKSVMAGAVLGYSVPNFLLGLTLIFVFAVWFRVLPSSGSSTWQHAILPVATFG
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LVNAAAIARFARSALIEVLEQPYIAAARADGIPKWEVVIRHALPNAAIPMVTMLGFVAAG
HHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
LLGGSAIVETVFAWPGLGSGFVRAITLSDLNVVQAMILLFTAFMVTINLIVDVLYAVLNP
HHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KIRLQKNG
CEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]