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The map label for this gene is 16119817

Identifier: 16119817

GI number: 16119817

Start: 7578

End: 8273

Strand: Direct

Name: 16119817

Synonym: Atu6004

Alternate gene names: NA

Gene position: 7578-8273 (Clockwise)

Preceding gene: 159162007

Following gene: 16119818

Centisome position: 3.54

GC content: 50.43

Gene sequence:

>696_bases
ATGATGGTATATCAGCGTCCTGTTTTCACGGTGATTAGCCTGCTGCGGATCCGGAACCGCGAAGAGGCCAAGCTCGTGCT
GATCGGAGCAGTCGTGGTTTATCGCAATTTTGTGGAACAAACCTTGGCTGATGCCCAAAAAAATTGGGTCAAGTCACTCG
TACTCTACGACGATCCGGGTGATGCTGTGACCGGCATCCTGACATGGTTCAGCAGGTATGCATGCTTGCACGGACCAAGG
TTGGGGCCGTTGGACACAATCGCCGTGAATGATAATCCGCTCTACATTTACTGTCCTCGTAGGAAGCTTGAGGAATATGC
AAAAGAACGTATTGTGTCTTTTCATTCAGAGATCGGCTCGGTCGTGTGCTCCATGTCACCCTTCGATGCAGGCGTGACGC
GTGAGAAGGTCCGCTATGGGCATAACCTGATATCCCCAGGGTCTTGCCTCCTTCCGGATGCTTTGGAAGCCTATGTCGCC
TTTCTCCCGAGCAAGTCGTTTCTGAAATTGCCATATAGCGTTTATGAGGTTCACAATGATCGTTATGTTCATAAGTTCTT
TGCGCTGCTCCCAGGATCCCGCTTTCATTTTGAAGTCGTAGCGGTTGGTTTGGCCTATCCCGCTGCCAAAAAAAGGCCTT
CTGGTCTTGGAATTCTGCGTTGTTGCTTCACCGGAAAGACAAACACCTGCCTGTAA

Upstream 100 bases:

>100_bases
ATGATCACCTTCCCTGCACATGCGTTTTTCAGCTATAAAGCAAGATTCAATCTCTGGGGCTCCAAAGAGCTCCGGATGCT
TACACCCCGCATAAAGCTTA

Downstream 100 bases:

>100_bases
GAAACTAAGCGTTGGAATGAAGCCAGAAGGTCCGCATCGCCGTTTACCGGTTTATTGTGAAATATCTTTTAAGTTATGAT
AATCTGCTGTTGCACGTCGG

Product: D protein

Products: NA

Alternate protein names: Gene 5 protein [H]

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MMVYQRPVFTVISLLRIRNREEAKLVLIGAVVVYRNFVEQTLADAQKNWVKSLVLYDDPGDAVTGILTWFSRYACLHGPR
LGPLDTIAVNDNPLYIYCPRRKLEEYAKERIVSFHSEIGSVVCSMSPFDAGVTREKVRYGHNLISPGSCLLPDALEAYVA
FLPSKSFLKLPYSVYEVHNDRYVHKFFALLPGSRFHFEVVAVGLAYPAAKKRPSGLGILRCCFTGKTNTCL

Sequences:

>Translated_231_residues
MMVYQRPVFTVISLLRIRNREEAKLVLIGAVVVYRNFVEQTLADAQKNWVKSLVLYDDPGDAVTGILTWFSRYACLHGPR
LGPLDTIAVNDNPLYIYCPRRKLEEYAKERIVSFHSEIGSVVCSMSPFDAGVTREKVRYGHNLISPGSCLLPDALEAYVA
FLPSKSFLKLPYSVYEVHNDRYVHKFFALLPGSRFHFEVVAVGLAYPAAKKRPSGLGILRCCFTGKTNTCL
>Mature_231_residues
MMVYQRPVFTVISLLRIRNREEAKLVLIGAVVVYRNFVEQTLADAQKNWVKSLVLYDDPGDAVTGILTWFSRYACLHGPR
LGPLDTIAVNDNPLYIYCPRRKLEEYAKERIVSFHSEIGSVVCSMSPFDAGVTREKVRYGHNLISPGSCLLPDALEAYVA
FLPSKSFLKLPYSVYEVHNDRYVHKFFALLPGSRFHFEVVAVGLAYPAAKKRPSGLGILRCCFTGKTNTCL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006064 [H]

Pfam domain/function: PF02027 RolB_RolC [H]

EC number: NA

Molecular weight: Translated: 26043; Mature: 26043

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVYQRPVFTVISLLRIRNREEAKLVLIGAVVVYRNFVEQTLADAQKNWVKSLVLYDDPG
CCEECCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
DAVTGILTWFSRYACLHGPRLGPLDTIAVNDNPLYIYCPRRKLEEYAKERIVSFHSEIGS
HHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHH
VVCSMSPFDAGVTREKVRYGHNLISPGSCLLPDALEAYVAFLPSKSFLKLPYSVYEVHND
HHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCHHHHHHCCC
RYVHKFFALLPGSRFHFEVVAVGLAYPAAKKRPSGLGILRCCFTGKTNTCL
HHHHHHHHHCCCCCEEEEEEEEEHHCCCCCCCCCCCEEEEEEECCCCCCCC
>Mature Secondary Structure
MMVYQRPVFTVISLLRIRNREEAKLVLIGAVVVYRNFVEQTLADAQKNWVKSLVLYDDPG
CCEECCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
DAVTGILTWFSRYACLHGPRLGPLDTIAVNDNPLYIYCPRRKLEEYAKERIVSFHSEIGS
HHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHH
VVCSMSPFDAGVTREKVRYGHNLISPGSCLLPDALEAYVAFLPSKSFLKLPYSVYEVHND
HHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCHHHHHHCCC
RYVHKFFALLPGSRFHFEVVAVGLAYPAAKKRPSGLGILRCCFTGKTNTCL
HHHHHHHHHCCCCCEEEEEEEEEHHCCCCCCCCCCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8469115; 8220492; 6327292 [H]